Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0081 ATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCGGCTTCTCTTTACCCTATGGTGGTGTTGAAAACTCGGCAACAGGTTGCTCATTCGCAACTTCCTTGCATCAGAACTGCATTTTCACTTGTCCGCCATGAAGGTTTTCGAGCTCTCTACCGAGGATTTGGTACTTCTCTAATGGGGACTATCCCGGCTAGAGCTCTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAAAGTGGGATTTCCAGAGACTACTGCAGCTACCATGGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTGTGGACTCCTGTTGATGTTGTGAGTCAAAGGCTCATGGTTCAACCTAGCTACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGATGCATTTAGAAAGATCCTCAATGCCGACGGCCTCCGAGGCCTCTACCGAGGATTCGGGATATCGATTTTGACCTACGCACCATCGAATGCTGTGTGGTGGGCTTCTTATTATGTAGCCCAGCGGCTAGTTTGGGGTGGAATTGGCTGCTGTTATCATGCAAAGAAGGTTGATGAAGGCAATGAAAATGGAGGTTGTAGTAATGTCTACAAACCGGATTCCAAGACTGTGATTGCGGTTCAGGGGGCGAGCGCAGCAATGGCCGGGAGTATATCGGCTTTGATAACAATGCCACTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAAAATGGGAGAAGAGGGCCAACTATAGGACAGACATTGAGGAATTTGGTAAGGGAAGGAGGGTGGACGGCATGTTACCGAGGCTTGGCACCGCGATGCGCATCAATGTCGATGTCTGCAACGACGATGATCACTACATATGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA 1047 47.18 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLPCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIKVGFPETTAATMANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPSYNNPNSSSTHYINGIDAFRKILNADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKVDEGNENGGCSNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1017029 1018075 + CmPI595203_09g000810.1 Cmu09g0081 423310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0081 348 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Cmu09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Cmu09g0081 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 344 - -
Cmu09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 216 IPR018108 -
Cmu09g0081 348 Pfam Mitochondrial carrier protein 253 341 IPR018108 -
Cmu09g0081 348 Pfam Mitochondrial carrier protein 36 110 IPR018108 -
Cmu09g0081 348 Pfam Mitochondrial carrier protein 125 217 IPR018108 -
Cmu09g0081 348 Gene3D Mitochondrial carrier domain 30 347 IPR023395 -
Cmu09g0081 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Cmu09g0081 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Cmu09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 338 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0081 Cmu-Chr9:1017029 Cmu10g1014 Cmu-Chr10:2124994 7.20E-10 dispersed
Cmu05g0749 Cmu-Chr5:6612702 Cmu09g0081 Cmu-Chr9:1017029 6.30E-64 transposed
Cmu11g0495 Cmu-Chr11:5359141 Cmu09g0081 Cmu-Chr9:1017029 1.60E-69 transposed
Cmu05g1857 Cmu-Chr5:28589918 Cmu09g0081 Cmu-Chr9:1017029 1.80E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0081 K15121 - csv:101210602 630.943