Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0137 ATGAAAGAGACCGATATAATGGAAAAGCCCATCGCCGCCGGCCTCTCAAATTCCGGCAACCACCACCAAAAGCCCAAAAACAAATCAAAAAAGCTTCTAATTTTAGCCCTGTCTTCGACCCTGCTCCTGGTCGGCGCCGTCGTGGGGATCGTCGCCGGAGTGACGAAATCGGAAAACTCCGGGAAATCACACGCCATTGTGAAGAGCACGTGCAGCAGCACGCTTTACCCGGATCTGTGCTTTTCTGCAATTTCGAATAGTGAAGGGGCTATGTTGAAAGTTAGTAATCAAAAGGATGTGATTGAGGTGTCAATTAATATAACGGTGAAAGCTGTGGAAGATAATTACTTTAGAGTGAAGAAATTGTGTGGGTTGAAGAATATTAGCCATAGAGAGAAAATTGCTCTTCATGATTGTCTTGAGACAATTGATGAGACGCTTGATGAACTTCATAAAGCTATTGTGGACCTTCATCAATACCCCAATAAAAAGTCTCTTAATCAACACGCTGATGATCTTAAAACCTTGCTTAGTTCCGCCATTACCAATCAGGAGACATGCCTCGATGGGTTTTCACACGACGAGGCAGACAAAAACCTGAGGGATAAGCTAAAAGAGGGGCAAGAGGAAGTAGAACACATGTGCAGCAATGCATTAGCCATGATTAAGAACATGACAGATACAGACATAGCCAACTACGAGGCTAAAATGGGAACAACCAACAATAGAAAGCTCAAGGAAGAACAGAACAACGGCGACGGCATCCAGTGGCCGGAGTGGCTGTCGGCCGGAGACCGGCGGCTGCTTCAGTCGTCGTCCGTGGAGCCAGATGTGGTGGTGGCGGCGGACGGCAGTGGGAACTTCCGGACGGTGGCGGCCGCCGTGGCGGCGGCGCCGGAAAAAAGTAGCAAGAGATATGTGATAAGAATTAAAGCTGGGGTTTATAGAGAAAATGTGGAAGTGCCGAAGAAGAAAACGAATATTATGTTTATGGGAGATGGAAGACGTAACACTATAATTACCGGCAGCCGGAATGTGGTCGACGGCAGCACCACTTTTAACTCTGCAACCGTCGCTGCGGTGGGAGGAGGATTTCTAGCGCGTGACATCACATTCCAAAACACAGCCGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGTCGGAGCAGATCTCTCCGCCTTCTACCAATGCGACATGTTGGCTTATCAAGACACTCTCTACGTCCACTCCAACCGTCAATTCTACATCAACTGTCTCATCTCCGGCACCGTCGATTTCATCTTCGGCAACGCTGCCGCCATTTTCCAAGACTGCGACATTCACGCGCGCAAACCAAACTCAGGTCAGAAAAACATGGTCACGGCCCAAGGACGGTCCGACCCGAACCAAAACACCGGAATCGTTATCCAGAAATGCCGGATCGGTGCCACGTCGGATCTCCGACCGGTCCAGAAGAACTTCCCGACGTTCCTTGGAAGGCCGTGGAAGGAATATTCGAGAACGGTGATTATGCAGTCAACGATTAGTGACGTCATTGACCCGAAGGGATGGCATGAGTGGAGCGGTAATTTTGCACTTAACACGTTGTTTTACGGTGAGTATCAGAATACTGGACCGGGGGCTTCAACCGGGGGGAGAGTGACGTGGAAGGGATTTAGGGTAATTCGGAGTGCCACGGAGGCTGAAAGTTTTACCGCAGGTAAATTCATTGGCGGTGGGAGTTGGTTGCGCTCTACTGGCTTTCCTTTCTCTCTAGGATTATGA 1767 49.63 MKETDIMEKPIAAGLSNSGNHHQKPKNKSKKLLILALSSTLLLVGAVVGIVAGVTKSENSGKSHAIVKSTCSSTLYPDLCFSAISNSEGAMLKVSNQKDVIEVSINITVKAVEDNYFRVKKLCGLKNISHREKIALHDCLETIDETLDELHKAIVDLHQYPNKKSLNQHADDLKTLLSSAITNQETCLDGFSHDEADKNLRDKLKEGQEEVEHMCSNALAMIKNMTDTDIANYEAKMGTTNNRKLKEEQNNGDGIQWPEWLSAGDRRLLQSSSVEPDVVVAADGSGNFRTVAAAVAAAPEKSSKRYVIRIKAGVYRENVEVPKKKTNIMFMGDGRRNTIITGSRNVVDGSTTFNSATVAAVGGGFLARDITFQNTAGPSKHQAVALRVGADLSAFYQCDMLAYQDTLYVHSNRQFYINCLISGTVDFIFGNAAAIFQDCDIHARKPNSGQKNMVTAQGRSDPNQNTGIVIQKCRIGATSDLRPVQKNFPTFLGRPWKEYSRTVIMQSTISDVIDPKGWHEWSGNFALNTLFYGEYQNTGPGASTGGRVTWKGFRVIRSATEAESFTAGKFIGGGSWLRSTGFPFSLGL 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1534782 1539958 - CmPI595203_09g001370.1 Cmu09g0137 423366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0137 588 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857(InterPro)
Cmu09g0137 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cmu09g0137 588 ProSitePatterns Pectinesterase signature 1. 302 321 IPR018040 -
Cmu09g0137 588 SUPERFAMILY Pectin lyase-like 274 587 IPR011050 -
Cmu09g0137 588 Gene3D - 271 588 IPR012334 -
Cmu09g0137 588 SMART PMEI_2 62 221 IPR006501 GO:0004857(InterPro)
Cmu09g0137 588 FunFam Pectinesterase 271 588 - -
Cmu09g0137 588 NCBIfam pectinesterase inhibitor domain 38 225 IPR006501 GO:0004857(InterPro)
Cmu09g0137 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 226 IPR035513 -
Cmu09g0137 588 MobiDBLite consensus disorder prediction 1 25 - -
Cmu09g0137 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Cmu09g0137 588 PANTHER PECTINESTERASE 31 579 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cmu09g0137 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 226 IPR035513 -
Cmu09g0137 588 CDD PMEI-like_3 69 226 - -
Cmu09g0137 588 FunFam Pectinesterase 63 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1408 Cmu-Chr7:29314194 Cmu09g0137 Cmu-Chr9:1534782 8.60E-109 dispersed
Cmu09g0137 Cmu-Chr9:1534782 Cmu09g0840 Cmu-Chr9:8206021 3.90E-173 dispersed
Cmu01g2158 Cmu-Chr1:34211739 Cmu09g0137 Cmu-Chr9:1534782 1.80E-124 transposed
Cmu07g1407 Cmu-Chr7:29305664 Cmu09g0137 Cmu-Chr9:1534782 1.40E-220 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0137 K01051 - csv:101212388 1034.25