Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0151 ATGACGTCTCGCGGTTCCTCCGCTTCTGCCAATGGCCTATTACCGCTTACCGTTTCCACGTCCGGCCGGCATCACGATGTTGAGCCTGGGCTCTCCTCCAGCAAAAGCATTGACGAGGAGGAAGAAGAGGCTGTATCGGATCCCTTCGACATCGACAATACCAAAAATGTTCCTCTCGAGATACTCAAGCGATGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTAGATATACTTTGGACTTAAAAAAAGAGGAAGAGAAAGAACAAAGAAGACGGATGATTAGAGCCCATGCACAAGTCATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAACAACAAATTGGTTCATCAGTATCACCTCCAATGTCAAGTGGTGACTATTCCATTAGTTTAGAACAGCTTGCTTCATTGACTCGTGATCAAAACTTGTCTTCTCTACAACAGTATGGAGGAGTTAAAGGCTTATCAAATTTATTGAAAACAAGTACCGAGAAAGGAATATTGGGAGATGAAACTGATCTACTCAAAAGAAGAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGCTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCATTGGCTCTGGGGATTAAAACAGAGGGTGTAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCTGTATTTCTTGTCATAATAGTCACAGGTATTCTATCTGATTCCATTCGAAGTGCAACGGTTAGTGATTATCGACAGTCTCTTCAGTTTCAGAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGAACTTTAAAGGTCTCAATATTTGACCTTGTTGTTGGGGATGTTGTACCTCTTAAAATTGGAGATCAGATCCCTGCTGATGGAATATTGATCACTGGTCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGCAAGGATCAGAAGACACCCTTTTTGATGTCTGGTTGTAAGGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTCCGTTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGTGGTTGCAGTTTCTGTGCTAGCCGTTCTTTTGGGCAGATACTTCACGGGAAATACACATGATGCAAATGGGAACGTTGAATTTCAGCGTGGGCAAACGAGTCTAGGTGATGCTGTAGATGGAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTGGTTGTTGCAGTGCCGGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAAATGATGGCTGATAAAGCATTGATGACTGTGGTCAAGGCATGTGTTGGAAAGAAAATGATTAATCCCCCAGATGATCCACTGCAGTTGCATTCATTGGTACTCACTCTGCTACATGAGGGCATTGCTCAGAACAGCACGGGCAATGTTTTTGTGGCTAAGGATGGTGGAGGTATAGAGGTCTCTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTAAAGCTGGGAATGAAGTTTGATGTTGCCAAATCAGAGTCCAAAATTCTCCATGTTGTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATACAGCGGGCCAACTCAGAAGTTTGCATACACTGGAAAGGAGCGGCAGAGATGGTGTTATCTTCATGTACAAAGTATGTGGACTTGAATGGTGAAGTGCACTCAATAGAGGACAATGAGGATTATTTTAAGGCAGCTATTAGTGACATGGCTGCAAGTAGTTTGCGTTGTGTTGCCATTGCATATAGATCATATGAATTGGAGAAGATTCCAATAGATGAACAACGTTTGGATCAATGGGATTTGCCTGCTGATGATCTTGTTTTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCAATGGTGTTAAAGAGGCTGTTAAAGTGTGCACAGATGCAGGTGTCAAGGTGCGCATGGTCACTGGAGACAATATACAAACTGCAAAAGCTATAGCAGTAGAGTGTGGAATACTAAACGCAACTGAAGATGCTTCCGAGCCTACAGTAATTGAAGGGAAAACATTCCGTGTATTGTCTGAGAAGGAAAGAGAACAAGTTGCCCCAAAAATAACGGTGATGGGGAGGTCTTCACCTAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGGGAAGTTGTTGCTGTAACTGGAGATGGGACTAATGATGCCCCTGCACTCCATGAGGCAGATATCGGTCTTTCTATGGGCATTCAAGGTACTGAAGTTGCTAAAGAGAGTTCTGATATTGTTATCTTGGACGATAACTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGCGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCCGCTCTTGTGATCAATGTTGTTGCAGCTGTGTCTTCCGGTGATGTTCCTTTAAATACCGTTCAGCTTCTTTGGGTTAACCTGATCATGGACACACTTGGTGCTCTAGCATTAGCCACTGAACCACCAACAGACCACCTGATGCATCGGTCACCTGTTGGGCGAAGGGAACCCCTTATAACGAATATTATGTGGAGGAATTTGATTGTACAGGCTTTGTATCAAGTCGCTGTACTTCTTGTCCTCAACTTCTATGCCATTGATATTCTTCAATTGAACAATGATAGCAAGGAGCATGCCTTTAATGTGAAGAATACAGTGGTTTTCAATGCATTTGTCCTCTGCCAAATATTCAATGAATTTAATGCTCGAAAACCAGATGAAATGAACGTGTTCAGTGGAGTGACGAAAAATTACCTCTTTATGGGAATAGTTGGAACAACGTTCGTGCTTCAGATTCTCATCGTCGAATTTGCTGGAAAATTTACTTCAACAGTAAAACTTGATGGGAAACAATGGGTTATATGCTTCGCTGTTGCCCTTGTGAGTTGGCCGCTGGCGGTTGTTGGCAAACTGATTCCAGTTCCGGAGACCCCATTGGCTAAATACTTCACAAAGCAAGTTCAACGGTGCAGAAGGTCACGTGGTGCTTAA 3216 42.94 MTSRGSSASANGLLPLTVSTSGRHHDVEPGLSSSKSIDEEEEEAVSDPFDIDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSVSPPMSSGDYSISLEQLASLTRDQNLSSLQQYGGVKGLSNLLKTSTEKGILGDETDLLKRRNAFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGIKTEGVEEGWYDGGSIAFAVFLVIIVTGILSDSIRSATVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKTPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLVVAVSVLAVLLGRYFTGNTHDANGNVEFQRGQTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALMTVVKACVGKKMINPPDDPLQLHSLVLTLLHEGIAQNSTGNVFVAKDGGGIEVSGSPTEKAILSWAVKLGMKFDVAKSESKILHVVPFNSEKKRGGVAIQRANSEVCIHWKGAAEMVLSSCTKYVDLNGEVHSIEDNEDYFKAAISDMAASSLRCVAIAYRSYELEKIPIDEQRLDQWDLPADDLVLLAIVGIKDPCRNGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAVECGILNATEDASEPTVIEGKTFRVLSEKEREQVAPKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYAIDILQLNNDSKEHAFNVKNTVVFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVGTTFVLQILIVEFAGKFTSTVKLDGKQWVICFAVALVSWPLAVVGKLIPVPETPLAKYFTKQVQRCRRSRGA 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1665535 1681961 - CmPI595203_09g001510.1 Cmu09g0151 423380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0151 1071 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 89 IPR024750 GO:0005516(InterPro)
Cmu09g0151 1071 Gene3D - 358 497 - -
Cmu09g0151 1071 FunFam Calcium-transporting ATPase 57 113 - -
Cmu09g0151 1071 Gene3D - 686 830 IPR023214 -
Cmu09g0151 1071 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Cmu09g0151 1071 PRINTS P-type cation-transporting ATPase superfamily signature 678 689 - -
Cmu09g0151 1071 PRINTS P-type cation-transporting ATPase superfamily signature 700 710 - -
Cmu09g0151 1071 PRINTS P-type cation-transporting ATPase superfamily signature 785 804 - -
Cmu09g0151 1071 PRINTS P-type cation-transporting ATPase superfamily signature 809 821 - -
Cmu09g0151 1071 PANTHER CATION TRANSPORTING ATPASE 490 1049 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cmu09g0151 1071 Gene3D - 59 112 - -
Cmu09g0151 1071 SUPERFAMILY Calcium ATPase, transduction domain A 283 379 IPR008250 -
Cmu09g0151 1071 MobiDBLite consensus disorder prediction 1 50 - -
Cmu09g0151 1071 NCBIfam HAD-IC family P-type ATPase 752 865 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0151 1071 Pfam haloacid dehalogenase-like hydrolase 673 799 - -
Cmu09g0151 1071 SUPERFAMILY HAD-like 628 890 IPR036412 -
Cmu09g0151 1071 Gene3D - 535 685 IPR023299 GO:0000166(InterPro)
Cmu09g0151 1071 Pfam Cation transporter/ATPase, N-terminus 153 221 IPR004014 -
Cmu09g0151 1071 SMART Cation_ATPase_N_a_2 152 226 IPR004014 -
Cmu09g0151 1071 FunFam Calcium-transporting ATPase 678 830 - -
Cmu09g0151 1071 FunFam Calcium-transporting ATPase 488 685 - -
Cmu09g0151 1071 Pfam Cation transport ATPase (P-type) 534 613 - -
Cmu09g0151 1071 FunFam Calcium-transporting ATPase 802 1051 - -
Cmu09g0151 1071 FunFam Calcium-transporting ATPase 259 382 - -
Cmu09g0151 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 690 IPR023299 GO:0000166(InterPro)
Cmu09g0151 1071 Pfam Cation transporting ATPase, C-terminus 870 1046 IPR006068 -
Cmu09g0151 1071 NCBIfam calcium-translocating P-type ATPase, PMCA-type 515 1049 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cmu09g0151 1071 Gene3D - 831 1040 - -
Cmu09g0151 1071 Pfam E1-E2 ATPase 282 484 - -
Cmu09g0151 1071 Gene3D - 250 357 - -
Cmu09g0151 1071 MobiDBLite consensus disorder prediction 1 18 - -
Cmu09g0151 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 1049 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0151 Cmu-Chr9:1665535 Cmu11g1166 Cmu-Chr11:22254297 0.00E+00 dispersed
Cmu09g0151 Cmu-Chr9:1665535 Cmu09g0708 Cmu-Chr9:6660862 1.10E-266 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0151 K01537 - csv:101214801 1854.34