Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0201 ATGGATTTCTGGCCAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTAGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCTAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCACCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA 936 48.82 MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSPRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2095673 2096715 - CmPI595203_09g002010.1 Cmu09g0201 423430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0201 311 SUPERFAMILY Mitochondrial carrier 12 295 IPR023395 -
Cmu09g0201 311 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085(InterPro)
Cmu09g0201 311 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085(InterPro)
Cmu09g0201 311 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085(InterPro)
Cmu09g0201 311 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Cmu09g0201 311 Gene3D Mitochondrial carrier domain 105 310 IPR023395 -
Cmu09g0201 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 300 IPR018108 -
Cmu09g0201 311 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Cmu09g0201 311 Pfam Mitochondrial carrier protein 212 302 IPR018108 -
Cmu09g0201 311 Pfam Mitochondrial carrier protein 110 202 IPR018108 -
Cmu09g0201 311 Gene3D Mitochondrial carrier domain 4 101 IPR023395 -
Cmu09g0201 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 201 IPR018108 -
Cmu09g0201 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Cmu09g0201 311 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 301 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0201 Cmu-Chr9:2095673 Cmu10g2930 Cmu-Chr10:35637679 7.40E-22 dispersed
Cmu07g1284 Cmu-Chr7:28150249 Cmu09g0201 Cmu-Chr9:2095673 1.40E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0201 K15109 - csv:101222165 545.814