Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0211 ATGGGAATCAATTCCAATCGAGTTGAAAACTTGGAATGTCGTGAAACGGTGTTGACAATTCCGGCGGAGGCAATGCCGGCGCCGCCTCAACCGGAGGTTGAGATTCATAAAGTCTGTTTGCCTCCCAACAAAACTACGTTTCAGAAACTCAAGCACAAGTTATCGGAAGTGTTCTTCCCTGATGATCCGTTTCATAGATTCAAGAACCAAACGTGGGTTAGAAAAGTGCTTTTAGGCCTTCAATTTCTGTTCCCTGTTTTTCAGTGGGGCCCTGATTATACCCTCGCTCTTTTCAAGTCTGACATCGTTTCTGGTCTTACAATTGCTAGCCTTGCTATTCCCCAGGGAATAAGTTATGCGAAACTAGCAAATTTGCCTCCAATCATCGGATTATATTCAAGTTTTGTGCCTCCACTGATATATTCTATCCTTGGGAGCTCTAGGCATCTTGCTGTTGGGCCAGTATCAATTGCCTCTTTGGTCATGGGATCGATGATTACTGAGGCAGTCTCTTATAACGAAAACCCAACTCTGTATCTTAAGTTGGCTTTTACAGCTACTTTCTTTGCTGGTGTATTCCAAGCATCTTTAGGCTTGTTAAGGTTAGGCTTTGTGATTGATTTTCTGTCAAAGGCTACTTTGGTTGGCTTTATGGCTGGTGCAGCAGTCATTGTGTCATTGCAGCAACTCAAAGGGTTGCTTGGAATTGCCCATTTCACCACCAAAATGCAATTTATTCCTGTCATGTCTTCTGTTTTCCACCGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTTCATTTTCCTACTGTTTCTTCTGGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCCGCTGCTCCACTGACATCAGTTATTTTGTCCACTCTTTTAGTGTTCTTGCTCAGAGCAAAATTTCCTGGAATCTCAGTGATTGGTCATTTGCCAAAGGGTGTCAATCCTCCATCTATGAACATGCTGTACTTTACTGGTCCTCAATTGGCACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCGCTCACCGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCATGCTATGTCACTACAGGATCATTTTCTCGGTCTGCTGTGAATTACAATGCTGGGGCACAAACAGCAGTTTCAAATGTTGTGATGTCTGCAGCTGTGCTCATAACATTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGACTAATTGATTACCAAGCAGCCTGTAGGTTGTGGAAAGTTGACAAACTCGATTTTTTAGCTTGTGTTTGTTCTTTCTTTGGTGTTCTTTTCATCTCGGTTCCATTGGGTCTTGCCATCGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACCAGGCCAAACACCATGGTTTTGGGGAATATTTCTGGAACTCATATATTCCAAAACCTTGACCGTTACCGGGATGCCTCAAGGGTGCCTTCATTTCTCATTCTTTCCATTGAATCTCCAATCTACTTTGCAAATTCAACATACCTACAAGAAAGGATTCTTAGGTGGGTTAGGGAAGAAGAAGAGCGGATAAAATCGACCAACGATAGCCCACTGAAATGTGTAATACTAGACATGACAGCTGTGACGTCCATAGATACAAGTGGTATAGAAACCGTATGTGAGCTTAGGAAGATGTTGATGCAAAAATCATTGCAGTTTGTGCTAGCAAATCCTGGTGGAAATGTGATGGAAAAACTGTATAAATCAAAGGTGTTGGAGCAGTTCGAGTTTAACGGTCTCTACCTCTCAGTTGGAGAAGCTGTGAAGGACATTTCTTCTGTATGGAAGAGGCTGCCATAA 1983 42.16 MGINSNRVENLECRETVLTIPAEAMPAPPQPEVEIHKVCLPPNKTTFQKLKHKLSEVFFPDDPFHRFKNQTWVRKVLLGLQFLFPVFQWGPDYTLALFKSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMITEAVSYNENPTLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIAHFTTKMQFIPVMSSVFHRKDEWSWQTIVLGFIFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTLLVFLLRAKFPGISVIGHLPKGVNPPSMNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSAAVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFLACVCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTHIFQNLDRYRDASRVPSFLILSIESPIYFANSTYLQERILRWVREEEERIKSTNDSPLKCVILDMTAVTSIDTSGIETVCELRKMLMQKSLQFVLANPGGNVMEKLYKSKVLEQFEFNGLYLSVGEAVKDISSVWKRLP 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2173488 2177215 - CmPI595203_09g002110.1 Cmu09g0211 423440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0211 660 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Cmu09g0211 660 Gene3D STAS domain 509 654 IPR036513 -
Cmu09g0211 660 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
Cmu09g0211 660 FunFam Sulfate transporter 31 509 655 - -
Cmu09g0211 660 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cmu09g0211 660 Pfam STAS domain 532 648 IPR002645 -
Cmu09g0211 660 PANTHER SULFATE TRANSPORTER 71 651 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0211 660 SUPERFAMILY SpoIIaa-like 534 650 IPR036513 -
Cmu09g0211 660 NCBIfam sulfate permease 85 648 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0211 660 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0211 Cmu-Chr9:2173488 Cmu09g0698 Cmu-Chr9:6481213 2.70E-215 dispersed
Cmu11g0124 Cmu-Chr11:1759506 Cmu09g0211 Cmu-Chr9:2173488 2.30E-230 transposed
Cmu06g1072 Cmu-Chr6:20576631 Cmu09g0211 Cmu-Chr9:2173488 2.00E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0211 K17471 - csv:101203079 1226.08