Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0219 ATGGAGATCAAAGAAAAGAAGAGAATTTCAAGTATCTCCTCTCCATTAATGTCATCCTCTTCGATGGCTATCCTCCTGGTTTTTCTTTGTTTCATTTTTAGCGATCCCAGCACAGCATTCGTAGCCGGGGCGGGCACTTCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGAGCAATCCAAGCAACTCTTAGATGCCAAGGATGATATCATAGCAACCGCTGCACCGGATAAGAAGGCACCGTCCCCGGTCGATTTGACAGCAAGAGTTTTCCTCCAAGAAGCTACTTACATTTTTCAGATGGCAGAGCCTGGATGGCATTGGGTGCGCCTACATTTCATGCCTGTTAAAAGCAATGACTTCGATCTCTTGCAGGCTAAATTTTCAGTAGCTACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTGTCAATCAAGTTCTTCCCTATGAGGAACTCAGCCGCTTTCATCAATGCCATCGAGGTCGTTTCGGCTCCGGTGGACTTGATTGCTGACTCGAATGTGGAGCTGTCTCCAGTTGGGACTATTGAGGGCCTGACGAAATATGCATTTCAGACATTGTATAGGTTAAACATGGGAGGACCTATAATCAATCCAAGAAATGACACTCTTGGGAGGACATGGGAGACGGATGAAGTTTACAGGACACCCAAAGTTGCTGGTAGGAATGTGGTTGTTGAGACCAACACCATCAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCAAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTGTACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTACTCAATAATCTGTATTTTAATGTATATGTGAACGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCCTGATTGTAGATGGACTGACAGTTCAAATTAGTCCAGCTAATGTCGAAACCGGTGATGCGAATGCCATTCTAAATGGCATAGAGGTATTGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCGGCAAATGGGTCTAATCGTGGCACGGTCGCGGCTGTTGGGTTTGCGATGATGTTTGGGGCGTTTGTTGGGCTCGGTGCCATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCCTGGTTGCTTCCTGTACATGCTGGTGACTCAAGCTTTATGACAAGTAAGACTTCATATGGGTCACACAAGACCAACATTTACTCCTCTACTTTAGGCCTTGGTAGGTTCTTCACTTTGGCAGAACTACAAGAGGCCACAAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACCAAAGTTGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATAACAGAATTCCAAACAGAAATTCAAATGCTTTCCAAACTCAGACACAGGCATTTGGTTTCTTTGATCGGTTACTGTGATGAAAACGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGCCCATTCAGAGATCATTTATATGGAAAGGACTTGTCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGCCTTCATTACCTTCACACAGGAACAGCCCAGGGAATCATCCACCGTGATGTCAAAACAACCAACATTTTACTCGACGAAAACTTCACCGCCAAAGTCGCCGATTTCGGGCTGTCAAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTGGCTGATTGGGCAATGCAATGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCCCTTCTAGCTGGAGCCATAAATCCTGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAACATGGTGTAGATAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTTCAAGAAGCATTCTCACAAGGCAAGACTGAAGATGAAAACAAAGCTGCAGGCACAGCAACCGTTTCCCCCGCTACCCCTACCACTGTTGATGCTTCGACAAATGCACCGAACTCCGGCAACCGCCCTGTTGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTACAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 2628 44.1 MEIKEKKRISSISSPLMSSSSMAILLVFLCFIFSDPSTAFVAGAGTSFIPKDNFLIDCGANKELGALPDGRVFKTDEQSKQLLDAKDDIIATAAPDKKAPSPVDLTARVFLQEATYIFQMAEPGWHWVRLHFMPVKSNDFDLLQAKFSVATEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFFPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLTKYAFQTLYRLNMGGPIINPRNDTLGRTWETDEVYRTPKVAGRNVVVETNTIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVETGDANAILNGIEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLAGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAAGTATVSPATPTTVDASTNAPNSGNRPVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2273735 2276362 + CmPI595203_09g002190.1 Cmu09g0219 423448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0219 875 MobiDBLite consensus disorder prediction 806 851 - -
Cmu09g0219 875 CDD STKc_IRAK 530 794 - -
Cmu09g0219 875 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524(InterPro)
Cmu09g0219 875 FunFam Receptor-like protein kinase FERONIA 229 414 - -
Cmu09g0219 875 PANTHER OS07G0166700 PROTEIN 512 801 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cmu09g0219 875 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Cmu09g0219 875 Gene3D Transferase(Phosphotransferase) domain 1 600 821 - -
Cmu09g0219 875 FunFam Receptor-like protein kinase FERONIA 600 814 - -
Cmu09g0219 875 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0219 875 Gene3D - 228 414 - -
Cmu09g0219 875 Gene3D - 53 207 - -
Cmu09g0219 875 FunFam Putative receptor-like protein kinase 53 205 - -
Cmu09g0219 875 FunFam receptor-like protein kinase FERONIA 488 599 - -
Cmu09g0219 875 MobiDBLite consensus disorder prediction 806 862 - -
Cmu09g0219 875 Pfam Protein tyrosine and serine/threonine kinase 529 788 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0219 875 SMART serkin_6 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0219 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0219 875 SUPERFAMILY Protein kinase-like (PK-like) 508 791 IPR011009 -
Cmu09g0219 875 Pfam Malectin-like domain 56 411 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0219 Cmu-Chr9:2273735 Cmu11g1831 Cmu-Chr11:30481069 2.50E-224 dispersed
Cmu11g1898 Cmu-Chr11:30986988 Cmu09g0219 Cmu-Chr9:2273735 6.90E-58 dispersed
Cmu01g2002 Cmu-Chr1:33237593 Cmu09g0219 Cmu-Chr9:2273735 1.70E-64 transposed
Cmu06g1650 Cmu-Chr6:27638867 Cmu09g0219 Cmu-Chr9:2273735 2.50E-256 transposed
Cmu11g0233 Cmu-Chr11:2800321 Cmu09g0219 Cmu-Chr9:2273735 1.40E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75768 PF12819 Malectin_like 1.70E-36 CL0202 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0219 - - - 0.0