Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0265 ATGGAAGGTGCTTCGCTTCACGGAACGCTTCACGCCACAATCTATGAAGTCGACAGGTTGCATACTGGTGGTGGATCCAATCTCTTCAGCATGTTGAAGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGTGAAACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGGGTTGGGAGGACACGAATATTGGAAACTGAACCCTCTAATCCAAGATGGTATGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGTGCATATGTACCTGTGGAAGACATCTTGGATGGGGAGGAAGTTGACAGATGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCAAAGATTCATGTAAAGCTTCAATACTTCAGTGTTACTAAAGATCGCAACTGGGGTCGTGGTATAAGAAGTCGTAAATTTCCTGGAGTTCCCTATACATATTACTCACAGAGACAAGGTTGTAAGGTTTCTTTGTATCAAGATGCTCATATCCCCGATAATTTTATTCCTAAAATTCCTCTTGCTGGAGGAAAAAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCCAAACACCTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTTAGGGACTCAAGGAGGCCAAAGCCAGGCGGAGACACCATGCTTGGTGAACTTCTTAAGAAGAAAGCAAGTGAAGGGGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTTAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGTTACTTCCAAGATACAGATGTGCACTGTGTCTTGTGTCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCACCAGAAGATTGTTGTGGTGGATAGCCCAATGCCAAGTGGAGAGTCAGATAAGAGGAGAATTGTGAGTTTCGTTGGTGGCATTGATCTATGTGATGGTAGGTATGACACACCCTTTCACTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTGCTGGTGCATCAATAACAAAAGGTGGACCGAGGGAACCTTGGCACGATATCCATTCCCGGCTTGAAGGGCCCATTGCCTGGGATGTTTTGTTCAATTTTGAGCAAAGGTGGAGGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGAGAGCTTGATGAAATAATTATTCCTCCGTCTCCTGTTATGTACCCAGACGACCATGACACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCTGAGACCCCTGAAGATGCTGCTAGAGCTGGTCTTGTCAGTGGGAAAGATAACATTATTGATAGAAGCATTCAGGACGCTTACATTAATGCCATTCGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGGGAGCTTTCCCTCAAGATCGTTAGTAAGATTTTAGCAGGAGAAAGGTTCACTGTCTATGTTGTTGTCCCAATGTGGCCAGAAGGTCTCCCAGAAAGTGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATCAAGGTAGCGAAGAAGACCCTCGCAACTACTTGACATTCTTCTGTCTTGGCAACCGGGAAGTCAAGAGGTCTGGAGAATATCAACCTGCAGAGGCACCAGAGGAGGATTCTGATTATTTAAGAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCGAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGCGCTTATCAGCCATATCATCTGTCAGCCCGGGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGATGAATCTTTCCTTCGTCCAGAAAGTGAAGAATGTGTTGCAAAGGTAAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGTGAATCACTCGAGAGGGACTTGCCCGGTCACCTCCTCCGCTATCCAGTTGGCATATCCAGTGAAGGAGAAGTCACAGAACTTCCAGGATTCGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGGACGAAATCCGACTACCTCCCTCCTATCCTCACTACCTAG 2427 43.96 MEGASLHGTLHATIYEVDRLHTGGGSNLFSMLKQNFEEAVGIGKGETKLYATIDLEKARVGRTRILETEPSNPRWYESFHIYCAHKASNVIFTVKDDNPIGATLIGRAYVPVEDILDGEEVDRWVPILDEEKNPIEGESKIHVKLQYFSVTKDRNWGRGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIQNAKHLIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERYFQDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAGASITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVQLRELDEIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDNIKPEDIGALHCIPRELSLKIVSKILAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIQALRDQGSEEDPRNYLTFFCLGNREVKRSGEYQPAEAPEEDSDYLRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSAREPARGQVHGFRMALWYEHLGMLDESFLRPESEECVAKVNRIADKYWDLYSSESLERDLPGHLLRYPVGISSEGEVTELPGFEFFPDTKARILGTKSDYLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2664199 2667975 + CmPI595203_09g002650.1 Cmu09g0265 423494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0265 808 FunFam Phospholipase D delta 201 444 - -
Cmu09g0265 808 Pfam C2 domain 44 126 IPR000008 -
Cmu09g0265 808 CDD C2_plant_PLD 6 148 - -
Cmu09g0265 808 SMART C2_3c 9 124 IPR000008 -
Cmu09g0265 808 Gene3D Endonuclease Chain A 200 442 - -
Cmu09g0265 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Cmu09g0265 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Cmu09g0265 808 CDD PLDc_pPLDalpha_2 492 701 - -
Cmu09g0265 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 FunFam Phospholipase D 467 700 - -
Cmu09g0265 808 PANTHER PHOSPHOLIPASE D 12 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cmu09g0265 808 SUPERFAMILY Phospholipase D/nuclease 442 738 - -
Cmu09g0265 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 SUPERFAMILY Phospholipase D/nuclease 151 436 - -
Cmu09g0265 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Cmu09g0265 808 Gene3D C2 domain 7 157 IPR035892 -
Cmu09g0265 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cmu09g0265 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Cmu09g0265 808 Gene3D Endonuclease Chain A 480 698 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1343 Cmu-Chr7:28723195 Cmu09g0265 Cmu-Chr9:2664199 1.90E-172 dispersed
Cmu08g1343 Cmu-Chr8:25651705 Cmu09g0265 Cmu-Chr9:2664199 4.00E-193 dispersed
Cmu09g0265 Cmu-Chr9:2664199 Cmu10g1179 Cmu-Chr10:4447374 3.00E-200 dispersed
Cmu07g1245 Cmu-Chr7:27763065 Cmu09g0265 Cmu-Chr9:2664199 0.00E+00 wgd
Cmu08g1270 Cmu-Chr8:25028518 Cmu09g0265 Cmu-Chr9:2664199 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0265 K01115 - csv:101206113 1610.51