Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0265 | ATGGAAGGTGCTTCGCTTCACGGAACGCTTCACGCCACAATCTATGAAGTCGACAGGTTGCATACTGGTGGTGGATCCAATCTCTTCAGCATGTTGAAGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGTGAAACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGGGTTGGGAGGACACGAATATTGGAAACTGAACCCTCTAATCCAAGATGGTATGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGTGCATATGTACCTGTGGAAGACATCTTGGATGGGGAGGAAGTTGACAGATGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCAAAGATTCATGTAAAGCTTCAATACTTCAGTGTTACTAAAGATCGCAACTGGGGTCGTGGTATAAGAAGTCGTAAATTTCCTGGAGTTCCCTATACATATTACTCACAGAGACAAGGTTGTAAGGTTTCTTTGTATCAAGATGCTCATATCCCCGATAATTTTATTCCTAAAATTCCTCTTGCTGGAGGAAAAAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCCAAACACCTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTTAGGGACTCAAGGAGGCCAAAGCCAGGCGGAGACACCATGCTTGGTGAACTTCTTAAGAAGAAAGCAAGTGAAGGGGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTTAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGTTACTTCCAAGATACAGATGTGCACTGTGTCTTGTGTCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCACCAGAAGATTGTTGTGGTGGATAGCCCAATGCCAAGTGGAGAGTCAGATAAGAGGAGAATTGTGAGTTTCGTTGGTGGCATTGATCTATGTGATGGTAGGTATGACACACCCTTTCACTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTGCTGGTGCATCAATAACAAAAGGTGGACCGAGGGAACCTTGGCACGATATCCATTCCCGGCTTGAAGGGCCCATTGCCTGGGATGTTTTGTTCAATTTTGAGCAAAGGTGGAGGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGAGAGCTTGATGAAATAATTATTCCTCCGTCTCCTGTTATGTACCCAGACGACCATGACACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCTGAGACCCCTGAAGATGCTGCTAGAGCTGGTCTTGTCAGTGGGAAAGATAACATTATTGATAGAAGCATTCAGGACGCTTACATTAATGCCATTCGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGGGAGCTTTCCCTCAAGATCGTTAGTAAGATTTTAGCAGGAGAAAGGTTCACTGTCTATGTTGTTGTCCCAATGTGGCCAGAAGGTCTCCCAGAAAGTGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATCAAGGTAGCGAAGAAGACCCTCGCAACTACTTGACATTCTTCTGTCTTGGCAACCGGGAAGTCAAGAGGTCTGGAGAATATCAACCTGCAGAGGCACCAGAGGAGGATTCTGATTATTTAAGAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCGAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGCGCTTATCAGCCATATCATCTGTCAGCCCGGGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGATGAATCTTTCCTTCGTCCAGAAAGTGAAGAATGTGTTGCAAAGGTAAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGTGAATCACTCGAGAGGGACTTGCCCGGTCACCTCCTCCGCTATCCAGTTGGCATATCCAGTGAAGGAGAAGTCACAGAACTTCCAGGATTCGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGGACGAAATCCGACTACCTCCCTCCTATCCTCACTACCTAG | 2427 | 43.96 | MEGASLHGTLHATIYEVDRLHTGGGSNLFSMLKQNFEEAVGIGKGETKLYATIDLEKARVGRTRILETEPSNPRWYESFHIYCAHKASNVIFTVKDDNPIGATLIGRAYVPVEDILDGEEVDRWVPILDEEKNPIEGESKIHVKLQYFSVTKDRNWGRGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIQNAKHLIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERYFQDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAGASITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVQLRELDEIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDNIKPEDIGALHCIPRELSLKIVSKILAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIQALRDQGSEEDPRNYLTFFCLGNREVKRSGEYQPAEAPEEDSDYLRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSAREPARGQVHGFRMALWYEHLGMLDESFLRPESEECVAKVNRIADKYWDLYSSESLERDLPGHLLRYPVGISSEGEVTELPGFEFFPDTKARILGTKSDYLPPILTT | 808 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2664199 | 2667975 | + | CmPI595203_09g002650.1 | Cmu09g0265 | 423494 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0265 | 808 | FunFam | Phospholipase D delta | 201 | 444 | - | - | |
Cmu09g0265 | 808 | Pfam | C2 domain | 44 | 126 | IPR000008 | - | |
Cmu09g0265 | 808 | CDD | C2_plant_PLD | 6 | 148 | - | - | |
Cmu09g0265 | 808 | SMART | C2_3c | 9 | 124 | IPR000008 | - | |
Cmu09g0265 | 808 | Gene3D | Endonuclease Chain A | 200 | 442 | - | - | |
Cmu09g0265 | 808 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 326 | 364 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | ProSiteProfiles | C2 domain profile. | 1 | 125 | IPR000008 | - | |
Cmu09g0265 | 808 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 149 | IPR035892 | - | |
Cmu09g0265 | 808 | CDD | PLDc_pPLDalpha_2 | 492 | 701 | - | - | |
Cmu09g0265 | 808 | Pfam | Phospholipase D Active site motif | 656 | 681 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | Pfam | Phospholipase D Active site motif | 327 | 364 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | FunFam | Phospholipase D | 467 | 700 | - | - | |
Cmu09g0265 | 808 | PANTHER | PHOSPHOLIPASE D | 12 | 795 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Cmu09g0265 | 808 | SUPERFAMILY | Phospholipase D/nuclease | 442 | 738 | - | - | |
Cmu09g0265 | 808 | SMART | pld_4 | 654 | 681 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | SMART | pld_4 | 326 | 364 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | SUPERFAMILY | Phospholipase D/nuclease | 151 | 436 | - | - | |
Cmu09g0265 | 808 | Pfam | Phospholipase D C terminal | 726 | 798 | IPR024632 | - | |
Cmu09g0265 | 808 | Gene3D | C2 domain | 7 | 157 | IPR035892 | - | |
Cmu09g0265 | 808 | PIRSF | PLD_plant | 1 | 808 | IPR011402 | GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro) | |
Cmu09g0265 | 808 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 654 | 681 | IPR001736 | GO:0003824(InterPro) | |
Cmu09g0265 | 808 | Gene3D | Endonuclease Chain A | 480 | 698 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g1343 | Cmu-Chr7:28723195 | Cmu09g0265 | Cmu-Chr9:2664199 | 1.90E-172 | dispersed | |
Cmu08g1343 | Cmu-Chr8:25651705 | Cmu09g0265 | Cmu-Chr9:2664199 | 4.00E-193 | dispersed | |
Cmu09g0265 | Cmu-Chr9:2664199 | Cmu10g1179 | Cmu-Chr10:4447374 | 3.00E-200 | dispersed | |
Cmu07g1245 | Cmu-Chr7:27763065 | Cmu09g0265 | Cmu-Chr9:2664199 | 0.00E+00 | wgd | |
Cmu08g1270 | Cmu-Chr8:25028518 | Cmu09g0265 | Cmu-Chr9:2664199 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0265 | K01115 | - | csv:101206113 | 1610.51 |