Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0307 ATGCATACTCGTATGGCTCAAAGTGAAGAAGGGAAGAAGAGGGTTGAAATGGGAGAGAGGTTAGGAGGTTATGCTATGAATCTTCGTGGTATTTTACTTCCCATGTGGGTTTTCTATTCCTTCTTCCCAATAATTGATGCCAGACCACACCTTGCTGGGTTTTCAATTTCTAGTACTGTTTTTGCTTCTCACACACATCCCATCTCTCTCATTGTTGCCAAAATGGAAGCTCAATCCCCAGGAGTTGCGGAGGTTAAAGTAGTTCACCACCAAGATTTGAACAAGAGAATTCTTATAGCATTGATTGTTTCTTCCACTCTTCTTGGAGTTATACTGCTGTTCCTTTTGTGTTTTTGGATATATCGTCGAAAAACGTCGAACCTTGATGATGGAAAATGTCAAAAGAATTTGGAGACTTCGAAAGGGATGCCGCTAAATCCCATCATATCCAGATTTAACTCCTTGAGGTTGGCTAACTTTAAAGGTTCGGTTTCCACCATCGACTATAAACTTTTGGAAGCAGCAACTGACAACTTCAGCAAAAGCAATGTTTTGGGTGAAGGCGGTACGGGACATGTTTACAAAGCTTGCTTCAATGATAAATTGCTGGCAGCTGTGAAGAAAATAGACAATGGAGGACCGGACGCTGAAAGAGAATTCGAGAATGAGGTGAATTGGTTGTGTAAAATACGACATCAAAACATAATCAAACTCTTGGGGCACTGCATTCATGGCGAGACACGGTTTCTCGTTTACGAGATGATGCAGAATGGATCTTTGGAGTCTCAGTTGCACGGACCATCTCACGGATCAGCTTTAACTTGGCATATCCGGATGAAGATTGCTGTTGATGTTGCAAGAGGCTTGGAATATCTTCACGAACATCGAAGTCCTCCTGTTGTTCATCGGGATTTGAAATCGTCAAATATCCTTTTAGATTCAGACTTTAATGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAAAACATAAAGCTCTCAGGAACTTTGGGTTATGTCGCCCCAGAGTACCTTTTAGACGGTAAACTAACAGATAAAAGTGATGTCTATGCGTTCGGAGTTGTTCTTTTGGAGCTTCTGACCGGGAAAAAACCCGTTGAGAAGATGGGACCTACTCAATCCCAATCTCTAGTTTCATGGGCAATCCCGCAGCTCAGTGACAGATCAAAGCTACCGAAAATTGTCGATCCTGTGATAAGGGACACGATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCTGTTTTATGTGTACAATCAGAACCGAGTTACCGACCGTTAGTTACCGACGTTTTGCATTCCCTCATCCCTCTTGTACCTGTAGAGCTTGGAGGATCTCTGAGAATTACAGAACCTCTGCATCCGAAAGTGCCTTCGTCGACCCGCTAA 1428 42.86 MHTRMAQSEEGKKRVEMGERLGGYAMNLRGILLPMWVFYSFFPIIDARPHLAGFSISSTVFASHTHPISLIVAKMEAQSPGVAEVKVVHHQDLNKRILIALIVSSTLLGVILLFLLCFWIYRRKTSNLDDGKCQKNLETSKGMPLNPIISRFNSLRLANFKGSVSTIDYKLLEAATDNFSKSNVLGEGGTGHVYKACFNDKLLAAVKKIDNGGPDAEREFENEVNWLCKIRHQNIIKLLGHCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHIRMKIAVDVARGLEYLHEHRSPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKMGPTQSQSLVSWAIPQLSDRSKLPKIVDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLHPKVPSSTR 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2924701 2928797 + CmPI595203_09g003070.1 Cmu09g0307 423536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0307 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0307 475 Gene3D Phosphorylase Kinase; domain 1 147 254 - -
Cmu09g0307 475 FunFam probable receptor-like protein kinase At1g80640 255 453 - -
Cmu09g0307 475 PANTHER OS01G0750732 PROTEIN 85 452 IPR050885 -
Cmu09g0307 475 SMART serkin_6 179 449 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0307 475 Gene3D Transferase(Phosphotransferase) domain 1 255 453 - -
Cmu09g0307 475 Pfam Protein tyrosine and serine/threonine kinase 182 390 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0307 475 ProSiteProfiles Protein kinase domain profile. 179 449 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0307 475 SUPERFAMILY Protein kinase-like (PK-like) 156 448 IPR011009 -
Cmu09g0307 475 FunFam Protein kinase superfamily protein 146 254 - -
Cmu09g0307 475 CDD STKc_IRAK 185 451 - -
Cmu09g0307 475 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0307 Cmu-Chr9:2924701 Cmu07g0206 Cmu-Chr7:1962706 3.80E-70 dispersed
Cmu05g1688 Cmu-Chr5:26966015 Cmu09g0307 Cmu-Chr9:2924701 1.20E-18 wgd
Cmu08g1295 Cmu-Chr8:25209838 Cmu09g0307 Cmu-Chr9:2924701 2.60E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75771 PF00069 Pkinase 2.30E-47 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0307 - - - 0.0