Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0315 ATGCCGGTTGACGGTTCTTCAACTGCCGCCTCCACCGTATGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACCGCCATTTGAGAGAACTCGAAGGTGCGGCGGAGCGGCTCAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTCAGAGCGGCGATCGACGGCTGCGATGGCGTTTTCCACACTGCGTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTTAACGGAACGAAGAACGTCATAATCGCGGCAGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACTTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGACATCGTCGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGTAAGAACACAAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCCGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTGCTGGTGCTAGGGCCATTGTTGCAATCCACCATTAATGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCTAAGACGTATGCCAATTCCGTTCAGGCATACGTACACGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTTCACAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTGTTCCTACCAAGTGCTCAGATGAAGTGAACTCGAGGAAGAAGGCATACAACTTCTCCAACAAGAAGCTGAAGGACTTGGGATTGGAGTTCACTCCAGCAAAGCAGTGTTTATACGACACCGTTAAGAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGTTGACTCCATTCGAATTCAATCTTGA 1017 52.41 MPVDGSSTAASTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNRHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPVPTKCSDEVNSRKKAYNFSNKKLKDLGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPVDSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2993924 3000053 + CmPI595203_09g003150.1 Cmu09g0315 423544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0315 338 Gene3D - 4 337 - -
Cmu09g0315 338 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
Cmu09g0315 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 317 IPR036291 -
Cmu09g0315 338 CDD FR_SDR_e 13 300 - -
Cmu09g0315 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 315 IPR050425 GO:0016616(PANTHER)
Cmu09g0315 338 Pfam NAD dependent epimerase/dehydratase family 13 245 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2285 Cmu-Chr2:36442409 Cmu09g0315 Cmu-Chr9:2993924 6.50E-85 dispersed
Cmu02g2293 Cmu-Chr2:36499576 Cmu09g0315 Cmu-Chr9:2993924 1.50E-78 dispersed
Cmu09g0315 Cmu-Chr9:2993924 Cmu10g2064 Cmu-Chr10:26503770 6.10E-147 dispersed
Cmu09g0315 Cmu-Chr9:2993924 Cmu11g1890 Cmu-Chr11:30921141 2.80E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0315 K09753 - csv:101213412 632.098