Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0397 | ATGTGGAGACCATGTTGGGAAGACCGTCGAGGACCATGCTATGAGTACGAGAGAAAAGATGGTAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTTGGTGATGAAGAGGCTGCTGAGCTTGATGACGATGATGATGCGAATGATTTAAATTACATTTCTGAAAGCCAAAAAGAGAAGCAGAAGATTGTGGAGCGAATGATGAGCTGGCAGGTGTCATATGGGCAAGCACAAGATCTCCGACCTCCGAATTATGACAAAGAAGTTTCTTTAAATCACATTCCATTGCTCACCAATGGGCAGGAGGTTTCTGGAGAACTTTCAGCTGCATCACCCGAGCATCATTTGATGGCATCTCCTGGACATCCTCGTGGGAAGCCAATATATTCTCTTCCTTATGCAGCTGATATTAACCAATCACCTAACGTGCGAGGTGTGGACCCTACAAAAGAGTATAATTCGTCGGGGCTAGGCAATGTAGCTTGGAAGGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCTGGACCAATGAGCACAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGACGACTCCTTACTAAATGATGAAGCTCGCCAGCCTCTTTCACGAAAGGTTTCTATTCCATCATCTAGGATAAACCCTTACCGAATGGTGATTGTTCTGCGGCTTGTAATTCTTTGTTTTTTCTTGCACTACCGAATCACAAATCCAGTACGCAATGCATATGCTCTATGGCTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTAAACCGTGAGACATATCTAGATCGACTTGCATTAAGATATGATAGGGAAGGGGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTACTATCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAACACAGCATTGAGCCTCGGGCTCCAGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATACGAGGAATTTAAGGTCCGCATCAACGGCTTGGTATCAAAGGCACAAAAGATTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCGTGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGCCAAAACGGTGGACTGGATTCCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTTCGAGTGTCTGCTGTTCTTACCAATGGCCCATTCTTGTTGAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCGTTAAGAGAAGCAATGTGTTTCATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAGAACGATCGATATGCCAACCGTAATACCGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTTCAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTATGAACCTCCTCACAAACCAAAGCATCGGAAAACAGGATTTCTGTCTTCACTCTGTGGTGGTTCTCGAAAGAAGAATTCAAAATCAAGCAAAACAAGTCCAGACAAGAAGAAATCAAGCAGGCACGTGGACCCGACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGTTAATGTCACAAATGACCCTGGAGCAAAGGTTTGGCCAGTCCTCTGTTTTTGTTGCCTCAACCCTTATGGAAAATGGCGGCGTTCCTCAATCGGCAACGCCCGAGTCTCTTCTAAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACAGACTGGGGATCCGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTATTGTATGCCACAACGTCCTGCTTTTAAAGGGTCTGCGCCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCCCTCGGTTCGGTGGAGATTCTTCTGAGTAGGCATTGCCCTATCTGGTATGGTTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTCGCATATGTGAACACTACGATCTATCCGATCACTGCAGTTCCTCTTCTCATGTATTGTACCTTGCCAGCTGTGTGTCTGCTGACGAACAAGTTCATCATTCCCCAGATTAGTAACGTTGCAAGTATATGGTTTATAGCCCTCTTTCTCTCCATCTTTGCGACGGGCATTCTCGAGATGAGATGGAGCGGGGTTGGGATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTCACATCCAAGGCGTCTGACGAAGACGGAGACTATGCTGAGCTTTACATGTTCAAATGGACGACTCTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTAGGGGTCGTAGCAGGAATATCTTACGCAATCAACAGTGGATACCAATCATGGGGACCACTGTTTGGCAAGCTATTTTTCGCTTTCTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAATAGAACACCCACCATTGTCGTCGTGTGGTCGATTCTGCTTGCTTCCATCTTCTCGTTGCTATGGGTGAGGATCAATCCGTTCACTACAACAGTCATAGGGCCCGACGTCGAGGAGTGTGGAATCAACTGCTAG | 3141 | 45.11 | MWRPCWEDRRGPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDEEAAELDDDDDANDLNYISESQKEKQKIVERMMSWQVSYGQAQDLRPPNYDKEVSLNHIPLLTNGQEVSGELSAASPEHHLMASPGHPRGKPIYSLPYAADINQSPNVRGVDPTKEYNSSGLGNVAWKERVDGWKMKQEKNAGPMSTAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKHSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPHKPKHRKTGFLSSLCGGSRKKNSKSSKTSPDKKKSSRHVDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAVPLLMYCTLPAVCLLTNKFIIPQISNVASIWFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRINPFTTTVIGPDVEECGINC | 1046 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3817256 | 3822828 | + | CmPI595203_09g003970.1 | Cmu09g0397 | 423626 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0397 | 1046 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 225 | 1015 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Cmu09g0397 | 1046 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 57 | IPR013083 | - | |
Cmu09g0397 | 1046 | SUPERFAMILY | RING/U-box | 12 | 53 | - | - | |
Cmu09g0397 | 1046 | Pfam | Zinc-binding RING-finger | 12 | 47 | IPR027934 | - | |
Cmu09g0397 | 1046 | MobiDBLite | consensus disorder prediction | 18 | 56 | - | - | |
Cmu09g0397 | 1046 | FunFam | Cellulose synthase | 435 | 609 | - | - | |
Cmu09g0397 | 1046 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 332 | 868 | IPR029044 | - | |
Cmu09g0397 | 1046 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 460 | 609 | IPR029044 | - | |
Cmu09g0397 | 1046 | MobiDBLite | consensus disorder prediction | 635 | 650 | - | - | |
Cmu09g0397 | 1046 | Pfam | Cellulose synthase | 318 | 1038 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Cmu09g0397 | 1046 | MobiDBLite | consensus disorder prediction | 611 | 652 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g0396 | Cmu-Chr4:12608437 | Cmu09g0397 | Cmu-Chr9:3817256 | 0.00E+00 | dispersed | |
Cmu05g1733 | Cmu-Chr5:27489601 | Cmu09g0397 | Cmu-Chr9:3817256 | 0.00E+00 | dispersed | |
Cmu09g0397 | Cmu-Chr9:3817256 | Cmu11g1148 | Cmu-Chr11:21710662 | 0.00E+00 | dispersed | |
Cmu09g0397 | Cmu-Chr9:3817256 | Cmu02g0903 | Cmu-Chr2:11686605 | 2.00E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0397 | K10999 | - | csv:101206590 | 2035.0 |