Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0464 ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCATCTTGTGGATGAAATTGAGTCCATCGATGGTGGGATTTCGGTTGATCCGACTCTCAATCGTGTTCGTGCTTCCGAATCTGTTTGTTCCAGTTCTCAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGAGAACGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGCCCTAGGAGATACATGGAAGATGAACATATACGGATAGATGATTTGTCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTATTCGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAACGTTCTTAGACTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATTGGTGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCGAAAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTCAGTAGTTCATCCGGGACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGCATTTAATGGTGGCAAATGCTGGAGATTGCCGAGCTGTTCTCAGCCGGAATGGGGAGGCAGTAGATATGTCTCAAGACCACCGGCCAGTTTATTCTCCAGAGAAGCAACGGGTAGAAGAGTTGGGTGGCTTTGTTGATGGTGGCTATCTCAACGGGGTTTTATCGGTTTCCAGGGCTTTGGGGGATTGGGACATGAAGCTCCCTGATGGTTCTCCTTCGCCTCTCATTGCAGAACCAGAATGCAGGCAGGTGGTGCTTACAGAAGAGGATGAGTTCTTGATCATAGCCTGTGATGGGATTTGGGACGTGATGTCGAGCCAACAAGCAGTCAATGTAGTTCGACAGGGGCTTCAACGTCACGATGACCCTGAGCGGTGTGCTCGAGACCTTGTCCTTCAGGCTTTGCGACTAGACTCATTCGACAACCTCACTGTTGTTGTTGTTTGCTTCTCCAGTTTCCATCCTGGCAATTCTCCACGACCACAGCAGCGGAACTTAAGATACTGCAGTCTCTCTGCACAGGCTCTTTGTAGCTTGCAAAGATGGCTGGATAACAGTGGATGCCAATGA 1185 48.19 MVAEAEVVVCSKSLPVLEVPYFGKETHLVDEIESIDGGISVDPTLNRVRASESVCSSSQSDIKPMKKIPDSDVDTENGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIGEVLPEEIENCLRKAFLLADRALADDSSVSSSSGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPVYSPEKQRVEELGGFVDGGYLNGVLSVSRALGDWDMKLPDGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHPGNSPRPQQRNLRYCSLSAQALCSLQRWLDNSGCQ 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4310254 4311958 - CmPI595203_09g004640.1 Cmu09g0464 423693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0464 394 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169(InterPro)
Cmu09g0464 394 Gene3D - 65 359 IPR036457 -
Cmu09g0464 394 CDD PP2Cc 85 355 IPR001932 -
Cmu09g0464 394 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Cmu09g0464 394 SMART PP2C_4 75 353 IPR001932 -
Cmu09g0464 394 MobiDBLite consensus disorder prediction 59 79 - -
Cmu09g0464 394 MobiDBLite consensus disorder prediction 65 79 - -
Cmu09g0464 394 PANTHER PROTEIN PHOSPHATASE 2C 67 355 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cmu09g0464 394 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Cmu09g0464 394 FunFam Probable protein phosphatase 2C 22 70 358 - -
Cmu09g0464 394 SMART PP2C_SIG_2 100 355 IPR001932 -
Cmu09g0464 394 SUPERFAMILY PP2C-like 80 357 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1658 Cmu-Chr5:26579653 Cmu09g0464 Cmu-Chr9:4310254 3.60E-35 dispersed
Cmu09g0322 Cmu-Chr9:3047075 Cmu09g0464 Cmu-Chr9:4310254 3.10E-33 dispersed
Cmu09g0464 Cmu-Chr9:4310254 Cmu11g1415 Cmu-Chr11:26375805 4.80E-34 dispersed
Cmu02g1709 Cmu-Chr2:30999635 Cmu09g0464 Cmu-Chr9:4310254 5.60E-72 transposed
Cmu11g1871 Cmu-Chr11:30827571 Cmu09g0464 Cmu-Chr9:4310254 1.30E-89 transposed
Cmu06g0411 Cmu-Chr6:4711647 Cmu09g0464 Cmu-Chr9:4310254 2.40E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0464 K14803 - csv:101216626 713.761