Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0529 ATGGCTACCGATTCTCATGCCCCTACTCCAAGAGGTCTTCTCTGTAATGCTGGGGCTGGTGCTGCTGCTGGAGTTCTTGCTGCTACGTTTGTTTGCCCTTTGGATGTTATCAAGACGAGATTTCAGGTTCATGGATTGCCAAACATCGGTAAAGGGAGTCTTATAGTTGGTAGTCTGCAACAAATTTTTCATAAGGAGGGGTTACGTGGAATGTATAGAGGTCTCGCACCTACTGTGCTTGCATTACTTCCTAACTGGGCTGTTTACTTCACAATATATGGGCAGCTTAAAAGCTTTCTTGGCTCTGATGGTGAAAATCGTCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGTGCCGGGGCTGCTACAACTATTGCAACCAATCCTCTATGGGTAGTTAAGACCAGGCTACAGACACAGGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTGAGGAGAATAGCCTCTGAAGAAGGCATTCGTGGATTGTACAGTGGGCTTGTACCTGCTTTGGCTGGTGTAAGTCACGTTGCGATCCAGTTTCCAACATATGAAAAAATAAAAAGTTATTTGGCTAGAAGAGACAATACGACAACGGACAAACTCACTGCACGCGATGTTGCGGTCGCCTCCTCTGTCTCCAAGATATTTGCTTCTACATTGACCTATCCACACGAGGTTGTACGATCCAGGCTTCAGGAACAAGGGTTTCACTCTGAGAAGCGTTATTCTGGGGTAGCCGATTGCGTAAAGAAAGTATTTCAACAAGATGGTCTCCCTGGTTTCTATAGAGGGTGTGCAACCAACCTTCTCAGGACGACGCCTGCTGCTGTCATCACATTTACAAGTTTTGAAATGATTCACCGTTTTCTTGTCAACTTATTTCCTCCCGATCCACATCCGCACACAATATGA 936 45.41 MATDSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKSFLGSDGENRQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALRRIASEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLARRDNTTTDKLTARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVADCVKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVNLFPPDPHPHTI 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4854976 4858470 + CmPI595203_09g005290.1 Cmu09g0529 423758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0529 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Cmu09g0529 311 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Cmu09g0529 311 Gene3D Mitochondrial carrier domain 104 301 IPR023395 -
Cmu09g0529 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Cmu09g0529 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 301 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Cmu09g0529 311 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 106 - -
Cmu09g0529 311 FunFam NAD+ transporter 107 302 - -
Cmu09g0529 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Cmu09g0529 311 Pfam Mitochondrial carrier protein 108 200 IPR018108 -
Cmu09g0529 311 Pfam Mitochondrial carrier protein 214 300 IPR018108 -
Cmu09g0529 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Cmu09g0529 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Cmu09g0529 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Cmu09g0529 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085(InterPro)
Cmu09g0529 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085(InterPro)
Cmu09g0529 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Cmu09g0529 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0562 Cmu-Chr1:6050536 Cmu09g0529 Cmu-Chr9:4854976 1.70E-118 dispersed
Cmu01g1932 Cmu-Chr1:32681236 Cmu09g0529 Cmu-Chr9:4854976 2.20E-46 dispersed
Cmu05g2462 Cmu-Chr5:33618345 Cmu09g0529 Cmu-Chr9:4854976 2.60E-19 dispersed
Cmu06g0510 Cmu-Chr6:5652007 Cmu09g0529 Cmu-Chr9:4854976 4.50E-25 dispersed
Cmu09g0529 Cmu-Chr9:4854976 Cmu09g0617 Cmu-Chr9:5644899 2.40E-20 dispersed
Cmu09g0529 Cmu-Chr9:4854976 Cmu04g0814 Cmu-Chr4:22719979 8.70E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0529 K15115 - csv:101204681 581.637