Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0580 | ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTCTCGCTTGTCTTTATGAGAAAGATCTCGATTACGAGTTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGCTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCATATACCCAATGTGAGCTACTTGTTCATGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAAGTTGTTGCCTTGCGCAACCAGAGTTAA | 651 | 50.38 | MASIKVHGSPISTATARVLACLYEKDLDYEFVLLDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLFMTPSKKLFESRPRVNAWVAEITARPSWAKVVALRNQS | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5294636 | 5296122 | - | CmPI595203_09g005800.1 | Cmu09g0580 | 423809 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0580 | 216 | Gene3D | - | 90 | 214 | - | - | |
Cmu09g0580 | 216 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cmu09g0580 | 216 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Cmu09g0580 | 216 | FunFam | Glutathione S-transferase F2 | 88 | 210 | - | - | |
Cmu09g0580 | 216 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Cmu09g0580 | 216 | Pfam | Glutathione S-transferase, C-terminal domain | 129 | 204 | IPR004046 | - | |
Cmu09g0580 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 215 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Cmu09g0580 | 216 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 77 | IPR004045 | - | |
Cmu09g0580 | 216 | CDD | GST_N_Phi | 4 | 76 | - | - | |
Cmu09g0580 | 216 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 216 | IPR010987 | - | |
Cmu09g0580 | 216 | SUPERFAMILY | Thioredoxin-like | 1 | 82 | IPR036249 | - | |
Cmu09g0580 | 216 | FunFam | Glutathione S-transferase F2 | 3 | 87 | - | - | |
Cmu09g0580 | 216 | SUPERFAMILY | GST C-terminal domain-like | 74 | 212 | IPR036282 | - | |
Cmu09g0580 | 216 | SFLD | Glutathione Transferase (cytosolic) | 1 | 212 | IPR040079 | - | |
Cmu09g0580 | 216 | SFLD | Main.5: Phi-like | 1 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu08g1340 | Cmu-Chr8:25619677 | Cmu09g0580 | Cmu-Chr9:5294636 | 8.50E-49 | dispersed | |
Cmu09g0578 | Cmu-Chr9:5282270 | Cmu09g0580 | Cmu-Chr9:5294636 | 5.70E-82 | dispersed | |
Cmu09g0579 | Cmu-Chr9:5292704 | Cmu09g0580 | Cmu-Chr9:5294636 | 1.10E-77 | tandem | |
Cmu09g0580 | Cmu-Chr9:5294636 | Cmu09g0581 | Cmu-Chr9:5298071 | 5.80E-50 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0580 | K00799 | - | csv:101212771 | 412.92 |