Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0609 ATGGTGGCTGGTGATGACGAACATTTCAGGCATGAGCCGCAACAATATGATTTGCGCTTCCGTGTAGAACAGATTTCTACATGGGTTGTTGTTGCGATGAAGAATATATTTCTTAGCTTACCATTTGATTCCTCCCTTTTGGACTCCTCCCTTTTGGACTCCTCTTCTCTCGATTCTTTTGGCGGTAGAGATAAGTGTGCGCTGAGGACTTGCCCAGTATTCGATCATTTCATGGAATCGTATATTGGAAACACTGTGATGAAGTTGGCTTTGAAAGCAGACCCCGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATTGGGCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTCACTGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTATTAACAACCAAAGGCACAAACTCACGTATCCTAGTGTTTAGTGAAGAACTTTTCTTCACTTATGTTCTTCCACCAATTATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTATAACGATCATGTTGTTTGGGGCAGTTGGTACTGTGATCTCTTTTTTCATCATATCACTAGGTTCACTCCATTTATTCAAGAAATTTGGTATTGGCTTCTTAGACGTGGGTGATTATTTTGCCCTTGGAGCAATCTTATCAGCGACAGATAGTGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTTGTTAATGATGCTACTTCTGTCGTATTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATGACCTCATCCAACGGCATTCAGCTTCTTGGAAACTTTTTCTATTTATTTTTTACGAGCACCTTGCTGGGAGCGATTGTTGGGTTGTCCAGTGCATACATCATAAAGAAGCTGTACTTTGCCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCAATCTAAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCACGAGTGACCACCAAGCATACTTTTGCAACATTCTCATTTGTTTCAGAGATTTTCATCTTTCTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTCGGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTTCCACTTTCCTTTATATCGAACTTGACTAGAAAATCTCAGACTGACAAAATTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGGGGTGCTGTATCTGTGGCCCTTGCTTATAATCAGTTTACGAGGTCAGGGCACACGCAACTACAAGGGAATGCCATCATGATTACTAGCACAATCACAATTGTTCTCATCACCAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCATGATAAACAAATAGACGGCATAATTGTAACAGATTCTCCACTTAAGTCGCTGAATGATCCTCTTCTGCCTGGTGTTGAAGATAATGAATCCGATGCCGGAGGATCGAACATTCCCCGTCCTACCAGCTTACGTATGATGTTGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGGATGTTCGATGATCGATATATGCGTCCTGTTTTTGGTGGAAGAGGCTTTGTACCTTTCATCCCCGGTTCACCAACTGAAAATTGGCGCCAAAGAAGAACTCCGCAAAGAACGAAGAACTCCGCAAAGAACGAAGAACTCCGTCTTTGTAATGGAATTGCAAAGAGAGATAATTGTATTCCGTCGGGGGAGAGGAAATCTTTGCTACATTACGCCATGGATTTCCTATTTCATCAGGATACTTCCGCCAAGAACTCCGTCAACATTTGGATTCCTTCCACTGCAAGACGATTCCAGGTTTGTGGATTTTTCTCGCTAATTTTTAGCTTCAGCATTTGA 2082 41.55 MVAGDDEHFRHEPQQYDLRFRVEQISTWVVVAMKNIFLSLPFDSSLLDSSLLDSSSLDSFGGRDKCALRTCPVFDHFMESYIGNTVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFTGTLILLTTKGTNSRILVFSEELFFTYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTVISFFIISLGSLHLFKKFGIGFLDVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVFFKAIQRFDLSHMTSSNGIQLLGNFFYLFFTSTLLGAIVGLSSAYIIKKLYFARHSTDREVALMILMPYLSYMTAELCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLGLVLVARAAFVFPLSFISNLTRKSQTDKIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLITNVVFGLLTKPIVRYMLSLHDKQIDGIIVTDSPLKSLNDPLLPGVEDNESDAGGSNIPRPTSLRMMLTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTENWRQRRTPQRTKNSAKNEELRLCNGIAKRDNCIPSGERKSLLHYAMDFLFHQDTSAKNSVNIWIPSTARRFQVCGFFSLIFSFSI 693
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 5585183 5598475 + CmPI595203_09g006090.1 Cmu09g0609 423838
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0609 693 Gene3D - 220 271 - -
Cmu09g0609 693 NCBIfam sodium/hydrogen exchanger 3 99 550 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0609 693 Pfam Sodium/hydrogen exchanger family 109 517 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cmu09g0609 693 PRINTS Na+/H+ exchanger signature 172 186 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0609 693 PRINTS Na+/H+ exchanger signature 227 237 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0609 693 PRINTS Na+/H+ exchanger signature 187 195 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0609 693 PRINTS Na+/H+ exchanger signature 158 169 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0609 693 PANTHER SODIUM/HYDROGEN EXCHANGER 93 629 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2236 Cmu-Chr3:31022407 Cmu09g0609 Cmu-Chr9:5585183 4.10E-197 dispersed
Cmu09g0609 Cmu-Chr9:5585183 Cmu09g1999 Cmu-Chr9:36062740 3.20E-158 dispersed
Cmu09g0609 Cmu-Chr9:5585183 Cmu09g0610 Cmu-Chr9:5598790 9.20E-174 tandem
Cmu06g0531 Cmu-Chr6:5886007 Cmu09g0609 Cmu-Chr9:5585183 3.30E-198 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0609 - - - 0.0