Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu09g0609 | ATGGTGGCTGGTGATGACGAACATTTCAGGCATGAGCCGCAACAATATGATTTGCGCTTCCGTGTAGAACAGATTTCTACATGGGTTGTTGTTGCGATGAAGAATATATTTCTTAGCTTACCATTTGATTCCTCCCTTTTGGACTCCTCCCTTTTGGACTCCTCTTCTCTCGATTCTTTTGGCGGTAGAGATAAGTGTGCGCTGAGGACTTGCCCAGTATTCGATCATTTCATGGAATCGTATATTGGAAACACTGTGATGAAGTTGGCTTTGAAAGCAGACCCCGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATTGGGCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTCACTGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTATTAACAACCAAAGGCACAAACTCACGTATCCTAGTGTTTAGTGAAGAACTTTTCTTCACTTATGTTCTTCCACCAATTATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTATAACGATCATGTTGTTTGGGGCAGTTGGTACTGTGATCTCTTTTTTCATCATATCACTAGGTTCACTCCATTTATTCAAGAAATTTGGTATTGGCTTCTTAGACGTGGGTGATTATTTTGCCCTTGGAGCAATCTTATCAGCGACAGATAGTGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTTGTTAATGATGCTACTTCTGTCGTATTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATGACCTCATCCAACGGCATTCAGCTTCTTGGAAACTTTTTCTATTTATTTTTTACGAGCACCTTGCTGGGAGCGATTGTTGGGTTGTCCAGTGCATACATCATAAAGAAGCTGTACTTTGCCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCAATCTAAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCACGAGTGACCACCAAGCATACTTTTGCAACATTCTCATTTGTTTCAGAGATTTTCATCTTTCTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTCGGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTTCCACTTTCCTTTATATCGAACTTGACTAGAAAATCTCAGACTGACAAAATTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGGGGTGCTGTATCTGTGGCCCTTGCTTATAATCAGTTTACGAGGTCAGGGCACACGCAACTACAAGGGAATGCCATCATGATTACTAGCACAATCACAATTGTTCTCATCACCAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCATGATAAACAAATAGACGGCATAATTGTAACAGATTCTCCACTTAAGTCGCTGAATGATCCTCTTCTGCCTGGTGTTGAAGATAATGAATCCGATGCCGGAGGATCGAACATTCCCCGTCCTACCAGCTTACGTATGATGTTGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGGATGTTCGATGATCGATATATGCGTCCTGTTTTTGGTGGAAGAGGCTTTGTACCTTTCATCCCCGGTTCACCAACTGAAAATTGGCGCCAAAGAAGAACTCCGCAAAGAACGAAGAACTCCGCAAAGAACGAAGAACTCCGTCTTTGTAATGGAATTGCAAAGAGAGATAATTGTATTCCGTCGGGGGAGAGGAAATCTTTGCTACATTACGCCATGGATTTCCTATTTCATCAGGATACTTCCGCCAAGAACTCCGTCAACATTTGGATTCCTTCCACTGCAAGACGATTCCAGGTTTGTGGATTTTTCTCGCTAATTTTTAGCTTCAGCATTTGA | 2082 | 41.55 | MVAGDDEHFRHEPQQYDLRFRVEQISTWVVVAMKNIFLSLPFDSSLLDSSLLDSSSLDSFGGRDKCALRTCPVFDHFMESYIGNTVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFTGTLILLTTKGTNSRILVFSEELFFTYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTVISFFIISLGSLHLFKKFGIGFLDVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVFFKAIQRFDLSHMTSSNGIQLLGNFFYLFFTSTLLGAIVGLSSAYIIKKLYFARHSTDREVALMILMPYLSYMTAELCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLGLVLVARAAFVFPLSFISNLTRKSQTDKIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLITNVVFGLLTKPIVRYMLSLHDKQIDGIIVTDSPLKSLNDPLLPGVEDNESDAGGSNIPRPTSLRMMLTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTENWRQRRTPQRTKNSAKNEELRLCNGIAKRDNCIPSGERKSLLHYAMDFLFHQDTSAKNSVNIWIPSTARRFQVCGFFSLIFSFSI | 693 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 5585183 | 5598475 | + | CmPI595203_09g006090.1 | Cmu09g0609 | 423838 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu09g0609 | 693 | Gene3D | - | 220 | 271 | - | - | |
| Cmu09g0609 | 693 | NCBIfam | sodium/hydrogen exchanger 3 | 99 | 550 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cmu09g0609 | 693 | Pfam | Sodium/hydrogen exchanger family | 109 | 517 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Cmu09g0609 | 693 | PRINTS | Na+/H+ exchanger signature | 172 | 186 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cmu09g0609 | 693 | PRINTS | Na+/H+ exchanger signature | 227 | 237 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cmu09g0609 | 693 | PRINTS | Na+/H+ exchanger signature | 187 | 195 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cmu09g0609 | 693 | PRINTS | Na+/H+ exchanger signature | 158 | 169 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cmu09g0609 | 693 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 93 | 629 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g2236 | Cmu-Chr3:31022407 | Cmu09g0609 | Cmu-Chr9:5585183 | 4.10E-197 | dispersed | |
| Cmu09g0609 | Cmu-Chr9:5585183 | Cmu09g1999 | Cmu-Chr9:36062740 | 3.20E-158 | dispersed | |
| Cmu09g0609 | Cmu-Chr9:5585183 | Cmu09g0610 | Cmu-Chr9:5598790 | 9.20E-174 | tandem | |
| Cmu06g0531 | Cmu-Chr6:5886007 | Cmu09g0609 | Cmu-Chr9:5585183 | 3.30E-198 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu09g0609 | - | - | - | 0.0 |