Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0632 ATGTCCCTTTCTCCCCATCTTTTGCTCCTTCTTCTCACTATAGCATCCCTTTCTGCCGCCGCCGACGCCGTTGAATGCCCTCTCAATTTCACCGTCCTTCGCCAGTTCTCCCAGGGCTCCGCCGTTTCCCGCCCCGATTTCTCCGACGAATGTCAATACATCCGCCTCGGTCTCCGCCTCGTCCTCTCGCAGTACCTCAAACTCACCGGCTCCTTCTTGCCCCCGGTGAACTCTTCCGATTTATGCTGGAATTCTTACCAATCGATAGTGGATGTCACATGGCCGAATTTCGACATTCGGAGCTCTTGCGGGTTTCAAACCGGGTGGATCTCACAGGGCTGTATGAACATCAGGACCAAATCCGAGTTCGAGAGAATCGTTCCTAAATCGGCCCTCGATGGTGTTGTTGCGAACTGTAATCAATCGCTTGAGAATGGTTCCCCCTGTGCCTCGTGCACGACCAGGCTCGCGATCGTTCAGGCCTCGTTCTTGACCGGTCCGTCGATCGGCAATGTCACCGATTGCCCCGCATATCCGTCGATCTACGTGGCGGCGTTTGTAAATCAGTTCGGACCGACCGATTGGGGAACTGCCAAATGCTTATTCTCGCTCCATCCCCTTTCGTCGGGGGATTCGAGGAGCAAGAAGCGGAATACGGTGGTGTTAGTGGTTTTAATTTGCTGTGGCGTTGCGGCAGCAGCGGTGGCGGTTGCAGGCGGGTTGTTTTTCTGGCGGAAACAGGGGAAAGTGAAGAAGAACGATAGAATTGGTAGAGTTGAGACAGGGTTGGGTTCTGGATTGGAGTCGATAAGTGCAAGCACTACTTTGGTGAAGTTCACATTCGATGAAATCAAGAGGGCGACAAGGAATTTTTCTAGAGATAACATAATTGGGAGAGGGGGTTATGGAAATGTGTATAAAGGGGTTCTATCAGATGATTCTGAAGTTGCATTGAAGAGGTTTAAGAACTGTTCTGCAGCAGGGGACGCCATTTTTGCTCATGAAGTGGAGGTAATTTCAAGTGTCAGGCATGTTAATCTTGTTGCTTTAAGAGGATATTGTATTGCAACTACACCAATGGAGGGTCACCAGAGAATAATTGTGTGTGATCTGATGAAGAATGGGAGTCTTTATGACCATTTGTTTGGGTTTTCAGATAAGAGGTTGAGTTGGCCAATTAGGCAAAAGATTGCTCTTGGCACAGCTAGGGGATTGGCTTATCTGCATTATGGAGCTCAGCCTGCCATTATCCATAGAGATATCAAAGCCAGCAACATTCTTTTGGATGAAAACTTTGATCCCAAGGTTGCTGACTTTGGTTTAGCCAAGTTCACTCCAGAAGGAATGACTCATTTGAGCACAAGAGTTGCTGGAACTATGGGGTATGTGGCGCCCGAGTACGCTTTATACGGCCAGTTGACGGAGAGGAGTGATGTGTATAGCTTTGGAGTTGTTTTGCTCGAGCTTTTGAGTGGGAGGAAGGCACTCGGGGTGAGGAGCCATGACAGCCAGCCCTTTCTAGTGACTGATTGGGCTTGGTCTTTGGTTAGGGAACAAAAAGCAATGGATGTTATTGAAGAAGGCATGCCAGAGCTGGGTTCTCCAGAGGTTGTTGAGAAGTATGTATTGATTGCTGTTCTTTGTTCCCATCCCCAGCTCTATGCCAGGCCAACAATGGATCAAGTTGTGAAAATGTTGGAAACTGAGCTCTCTGTTCCTTCAATCCCGGAGAGACCCATCCCTCTAGTTGCTGATATTGATGAAATTGAGAGATCTATGAGTAGTAGTGGTTCGGCTCAGCATTCTGGTTCAGTTGGCTTTCATAGTTTCACATTACAAAATGACCATAGACTGAAGCACGACCTACATTCTTACGAAAAGATGGTTGTGAGGAATCAGCTCGAGAAGGGGCTTGCATCTGATTGCCTAGTTGGTGAGACAACTTACCAATACCGAGGGCTGATTGGTTGTTGGTCTTCGAGGATGATCGACCATACTGGGATTGAAACACGACTTAGACTCCGACGAAAGGAATTGGAGTCCATGCTTCTACTCCATTGTAAAGATGGACAGATTTGTTTTCTTTCCTCTATAAGTGCATATAATAGGGGTTTGACTGTGGAGATTGGACCACGCCGCAGAGGGAGAGAGAGAGAATCGTCGGGCGACATGGCCGCCGCCAGGCCTCCCAAAACGCCGATGAAGGCAGGACGGCTGCCAGTAGGTCTATTTGCTGCACAATGTGAGGAATGCTTCAAATGGAGGTTGATAAGTACCCAAGAGGAGTACGAGGATATTAGAAGCAAAATGATAGAAGAACCCTTTACTTGCCATAGGAAAACTGATACTTCTTGCAACGATCCTCCCGATATTGATTATGATACAACTCGAACTTGGGGAATTGACAAACCCAACATCCCAAAGACCCCAGAAGGGAAGACAGTGAGATCTTCTACGGAGATGCTAGCTTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAGCTTCAGTTTTGCTGTCCCAAAACATCGGATACAACAACTGGAAGTGAACCTCTCAGTAAGCCTTGAAGAGCGCATTGTTTTAAGACGACTTGCTTCCTTCTTGCTTCCTTCCAGTAAGATTCTGTCTTTCTTTCTTTGTTTAGGGACCTCTAGTGAGCCACTTAGGATTCCTTGTAGCATTCTTCTACTATTACTCCTGATCTTAAACCCTTGTGAATGGTTCTATTTTGGCTTGAAAGATGTAGAACCATGA 2766 47.18 MSLSPHLLLLLLTIASLSAAADAVECPLNFTVLRQFSQGSAVSRPDFSDECQYIRLGLRLVLSQYLKLTGSFLPPVNSSDLCWNSYQSIVDVTWPNFDIRSSCGFQTGWISQGCMNIRTKSEFERIVPKSALDGVVANCNQSLENGSPCASCTTRLAIVQASFLTGPSIGNVTDCPAYPSIYVAAFVNQFGPTDWGTAKCLFSLHPLSSGDSRSKKRNTVVLVVLICCGVAAAAVAVAGGLFFWRKQGKVKKNDRIGRVETGLGSGLESISASTTLVKFTFDEIKRATRNFSRDNIIGRGGYGNVYKGVLSDDSEVALKRFKNCSAAGDAIFAHEVEVISSVRHVNLVALRGYCIATTPMEGHQRIIVCDLMKNGSLYDHLFGFSDKRLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDENFDPKVADFGLAKFTPEGMTHLSTRVAGTMGYVAPEYALYGQLTERSDVYSFGVVLLELLSGRKALGVRSHDSQPFLVTDWAWSLVREQKAMDVIEEGMPELGSPEVVEKYVLIAVLCSHPQLYARPTMDQVVKMLETELSVPSIPERPIPLVADIDEIERSMSSSGSAQHSGSVGFHSFTLQNDHRLKHDLHSYEKMVVRNQLEKGLASDCLVGETTYQYRGLIGCWSSRMIDHTGIETRLRLRRKELESMLLLHCKDGQICFLSSISAYNRGLTVEIGPRRRGRERESSGDMAAARPPKTPMKAGRLPVGLFAAQCEECFKWRLISTQEEYEDIRSKMIEEPFTCHRKTDTSCNDPPDIDYDTTRTWGIDKPNIPKTPEGKTVRSSTEMLAFVEANPQYKDIPLSSFSFAVPKHRIQQLEVNLSVSLEERIVLRRLASFLLPSSKILSFFLCLGTSSEPLRIPCSILLLLLLILNPCEWFYFGLKDVEP 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5846196 5854206 + CmPI595203_09g006320.1 Cmu09g0632 423861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0632 921 SUPERFAMILY DNA-binding domain 781 847 IPR016177 GO:0003677(InterPro)
Cmu09g0632 921 PANTHER OS01G0750732 PROTEIN 49 596 IPR050885 -
Cmu09g0632 921 Pfam Protein kinase domain 293 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0632 921 Gene3D Phosphorylase Kinase; domain 1 263 370 - -
Cmu09g0632 921 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 252 370 - -
Cmu09g0632 921 Pfam SPARK 23 175 IPR043891 -
Cmu09g0632 921 Gene3D - 744 791 - -
Cmu09g0632 921 Gene3D Transferase(Phosphotransferase) domain 1 372 581 - -
Cmu09g0632 921 Pfam CW-type Zinc Finger 745 790 IPR011124 GO:0008270(InterPro)
Cmu09g0632 921 CDD STKc_IRAK 297 567 - -
Cmu09g0632 921 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 372 574 - -
Cmu09g0632 921 SMART serkin_6 291 566 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0632 921 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524(InterPro)
Cmu09g0632 921 ProSiteProfiles Zinc finger CW-type profile. 738 793 IPR011124 GO:0008270(InterPro)
Cmu09g0632 921 ProSiteProfiles Protein kinase domain profile. 291 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0632 921 MobiDBLite consensus disorder prediction 713 732 - -
Cmu09g0632 921 SUPERFAMILY Protein kinase-like (PK-like) 268 567 IPR011009 -
Cmu09g0632 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1069 Cmu-Chr5:10064083 Cmu09g0632 Cmu-Chr9:5846196 3.50E-98 dispersed
Cmu09g0632 Cmu-Chr9:5846196 Cmu10g2905 Cmu-Chr10:35423622 1.90E-73 dispersed
Cmu09g0632 Cmu-Chr9:5846196 Cmu11g0233 Cmu-Chr11:2800321 3.40E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75781 PF00069 Pkinase 1.60E-40 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0632 - - - 0.0