Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0698 ATGGGTAACGCCGATTACGTGTACCCATCATCCACGGCAGCAGGGGATGGCGGCGAGTGCATGCACAGGGCGGCGATTCCGCCGGCGCAGCCGTTCGTGAAGTCGCTGAAGAACGGTCTGAAGGAGACATTCTTCCCGGACGACCCGCTCCGGCAGTTCAAGAATCAGCCGGCGGGAAGGAAGATAATTCTGGGTTTGCAGTACTTTTTTCCTGTGGTGGAATGGGGGCCGCGCTATAATTTAGGGCTTCTGAAATCGGATCTTATCTCTGGAATCACCATTGCTAGCCTCGCCATTCCTCAGGGCATTAGCTACGCAAAGCTTGCTAACTTGCCTCCTATACTCGGCCTCTATTCGAGTTTTATTCCGCCGTTAATTTATGCGATGATGGGAAGCTCAAAGGACTTGGCCGTCGGAACAGTGGCAGTGGCGTCACTTCTGATTAGCTCAATGTTAGGAGCAGAGGTTAACCCTGTTCAAAACCCCACTCTTTATCTCCATCTTGCTTTCACCGCGACTTTCTTCGCCGGAGTCTTCCAAGCCTCCTTAGGGCTCTTAAGGCTAGGGTTCATTGTTGATTTCTTGTCACATGCAACCATTGTTGGGTTCATGGCGGGCGCTGCCACGGTGGTGTGCCTACAGCAACTCAAAGGCATCCTAGGGCTAACCCATTTCACCCACGCGACCGACCTCGTTTCCGTCCTCCGCTCCGTCTTCTCCCAAGTTCACCAGTGGAGATGGGAAAGTGGGGTCTTGGGATGCTGTTTTCTCTTCTTCCTCCTCATCACTAGATACTTTAGCAAGAAAAAGCCAAAGTTCTTCTGGATATCAGCAATGGCACCTTTGACCTCAGTGATTTTAGGAAGCCTTCTAGTGTTTCTTACTCACGCTGAAAAACACGGCGTCGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCAATAACAAATTTGGTGTTTGTGTCACCTTATCTTTCAACTGCCATTAAAACTGGCATCATCACTGGCGTCATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCGATGTTCAAGCATTACAACATCGATGGCAACAAAGAAATGGTAGCCATTGGCACAATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACAACAGGGCCCTTTTCGCGATCGGCTGTGAATTACAATGCAGGATGCAAAACCGCGGTATCAAACGTGGTAATGGCGATTGCAGTGATGTTGACATTGTTATTCTTGACTCCTCTCTTCCACTACACTCCTCTGGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATTGATTACGAAGCTGCTATTCACTTGTGGAAGGTTGATAAATTTGATTTCCTTGTCTGCATTGGCGCTTATGCTGGTGTTGTCTTTGCCAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTGATATCTCTGCTTAGACTACTTTTGTTCGTTGCGAGGCCGAGGACGCTTGTGCTTGGAAACCTTCCCAATTCCACAGTTTACAGGAACGTAGAGCAGTACCCGAATGCCGATCATGTTCCTGGCATTCTCATACTTGAGATTGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGATAGGATAAAAGCTTCGGGTGAAAGTACCTTACAATATGTCGTATTGGACATGAGTGCTGTTGGCAACATTGATACAAGTGGAATAAGTATGTTTGAAGAGATGAAGAAGATTTTAGAAAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGAGCTGAGGTAATGAAGAAGCTGGACAAGGGCAAGTTCATTGAGACCCTTGGACACGAATGGATCTATCTAACAGTTGCCGAAGCTGTAGCGGCCTGCAACTATATGCTTCACTCTTGCAAACCGAACCCTGTAACTGATGAGAAAGCTGAGCCATGGAACAATGTGTAA 1986 47.63 MGNADYVYPSSTAAGDGGECMHRAAIPPAQPFVKSLKNGLKETFFPDDPLRQFKNQPAGRKIILGLQYFFPVVEWGPRYNLGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLISSMLGAEVNPVQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFSQVHQWRWESGVLGCCFLFFLLITRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITNLVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADHVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEMKKILERRGLKIVLANPGAEVMKKLDKGKFIETLGHEWIYLTVAEAVAACNYMLHSCKPNPVTDEKAEPWNNV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6481213 6489223 - CmPI595203_09g006980.1 Cmu09g0698 423927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0698 661 Gene3D STAS domain 495 641 IPR036513 -
Cmu09g0698 661 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Cmu09g0698 661 Pfam STAS domain 516 634 IPR002645 -
Cmu09g0698 661 SUPERFAMILY SpoIIaa-like 517 639 IPR036513 -
Cmu09g0698 661 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Cmu09g0698 661 PANTHER SULFATE TRANSPORTER 61 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0698 661 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020(InterPro)
Cmu09g0698 661 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cmu09g0698 661 NCBIfam sulfate permease 71 634 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g0698 661 FunFam Sulfate transporter 31 495 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1072 Cmu-Chr6:20576631 Cmu09g0698 Cmu-Chr9:6481213 1.20E-199 dispersed
Cmu06g1073 Cmu-Chr6:20606930 Cmu09g0698 Cmu-Chr9:6481213 2.00E-199 dispersed
Cmu09g0211 Cmu-Chr9:2173488 Cmu09g0698 Cmu-Chr9:6481213 2.70E-215 dispersed
Cmu09g0698 Cmu-Chr9:6481213 Cmu11g0124 Cmu-Chr11:1759506 1.10E-208 dispersed
Cmu05g0533 Cmu-Chr5:4576573 Cmu09g0698 Cmu-Chr9:6481213 7.80E-284 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0698 K17471 - csv:101222260 1242.25