Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0708 ATGAGCAAATGCGAATCTACTTACCATGAGACTTTACTTCTCAACATCAGCAAAGCTCGAAGGAGATGGAGATTTGCCTATGCAGCAATATATTCAATCCGGGCCATGCTTTCTGTTGCAGTGACAAAAAGAAATGGCCATTACAGTTCACTCAACTTTGAGAACTGGCAGGAAGATTGTTATGAGGAACAAATTATCTGCACCAAAGATGATCAGAAGAAGCTGATTGAAATGGTGAAGAACAAAGACAAAGAAGCTTATCATGAGCTTGGAGAAGGTGCAACAATTGCAGCTTCTCTTGGAACGAATCCGGAGAATGGAATCAAGGACAATAGTGATATCTTGAATGAACAACGTCAAATATTTGGTTCTAACACTTACCACAAGCGGCCTCGGAAGAGTTTCTTTCATTTTGTAGTGGAAGCTTTCAAGGACACCACCATCCTCATTTTACTTGTATGTGCGGCTCTGGCGCTTGGGTTTGGAATAAAAGAACATGGAGTTCAAGAAGGATGGTATGAAGGAGGGAGCATATTTGTAGCTGTTGCTTTGGTAGTTGCTGTGTCAGCAATTAGTAACTTCAGACAGGAGGTTCAATTCGAGAAGTTGTCGAAAATAAGTAACAACATCAAAGTGGAGGTACTAAGAGATGGAAGGCGCATACAAGTTTCCATATTCGATATTGTGGTTGGAGATGTCGTGGTTCTAAAGCTTGGGGACCAAATTCCAGCTGATGGATTGTTCTTGAGCGGCCATTCTTTGCAGGTGGATGAGTCAAGCATGACAGGAGAAAGCGATCATGTGGAACTCAATACAACAGAGAACCCCTTCTTGTTGTCTGGAACAAAAGTAGTAGATGGCTATGGTCAGATGCTGGTGACATCAGTGGGAATGGACACAGCATGGGGTGAGATGATGAGTTCCATATCTCGGGATTCTGAGGAGCAAACACCATTGCAAGTTCGTCTTAACAAATTAACCACTTCTATAGGAAAGGTAGGCCTCTCAGTTGCTTTGCTGGTCCTTGTTGTCATGTTAGCACGCTATTTCACTGGAAACACAAAGGATGATTTTGGGAACACAGAGTACAATGGTCGAAAAACGGACATAGATGATGTGCTTAATGCAATTATCCGTATAGTTGCTGCTGCAGTTACCATAGTAGTGGTTGCAATCCCTGAAGGCTTACCATTGGCTGTGACACTAACACTTGCTTACTCTATGAAGAGAATGATGGCAGATCAGGCAATGGTGAGGAAACTGTCGGCTTGTGAAACAATGGGATCGGCAACTGTGATTTGCACTGACAAAACAGGTACTTTGACATTAAACCAAATGAAAGTAACCAAATTCTGGCTTGGCCAAGAGTTCATTGAGGAAGAAAACTCTTCCAATACCATAGCAGAGGCTGTTCATGAGTTGATAAATCAAGGAGTTGGCTTGAACACAACTGGTAGTGTCTATCGATCTTCACCAGAATCCAAAACTGAAATCTCTGGTAGTCCAACTGAGAAAGCGATTCTATCTTGGGCGGTCACAGAATTCGGTATGGACATGGAGAAGTTGAAGAAGTCATATGCCATTCTTCATGTGGAAACCTTCAACTCAGAGAAGAAAAGAAGTGGGGTTTTGGTGAGAAAATTGGCTGACAACACAATCCATCAGCATTGGAAAGGAGCTGCTGAGATGATACTCTCAATGTGTTCAAGTTACTTTGAAAGGAATGGGAAAACATATGACTTGGATATTGAGAACCGAAAAAAACTTGAGAACATTATCCAAGGAATGGCAGCAAGTAGCCTAAGATGCATTGCCTTTGCTTATAAACAAATCTCAGAGGACGAGGAAAAAAATGGCATACCAAACGTCTCAAACTCGAAACAAGATGGCTATACATTAATGGGAATAGTTGGCATTAAAGATCCATGTAGGCCAGGGGTGAAGAAAGCCGTGGAAACATGTAAATCAGCTGGAGTTTCCATTAAGATGATAACAGGAGACAACATTTTCACAGCAAAAGCTATAGCCACAGAATGTGGAATACTAGATTTTGATCACAACACTGCAAGCAGAGGCGAAGTAATAGAAGGTTCCGAGTTCCGAAACTACTCGAGTGAAGAGAGACTGCGGAGAGTTGATCAAATCAAGGTGATGGCAAGATCCACTCCATTTGACAAGCTTTTGATGGTTCAATGCTTGAAACAGAAAGGCCATGTGGTAGCAGTAACTGGAGACGGCACAAATGATGCACCGGCTCTAAAAGAAGCTGACATAGGACTTTCCATGGGCATTGAAGGCACTGAGGTTGCAAAAGAGAGTTCAGACATTGTTATCTTGGATGATAACTTCACCACAGTAGCCACAGTCTTGAGGTGGGGAAGATGTGTATATAACAACATCCAAAAATTCATCCAATTTCAATTGACGGTCAATGTCGCAGCTCTTACAATTAACTTTATAGCAGCAGTATCAGCCGGAGAGGTTCCTTTAACAGCAGTCCAATTATTGTGGGTGAATCTCATAATGGATACATTGGGTGCTCTTGCACTTGCTACTGAGAGACCCAATGATGAATTAATGCACAAGGCTCCCGTGGGAAGAACTGAGCCCCTAATAACAAATATCATGTGGAGAAACCTATTAGCTCAAGCTCTATACCAAATAACAATACTCTTAATTTTCCAGTTCCAAGGAAGCACCATCTTCAAAGTAAGTGCAGAGGTAAACGATACACTAATCTTCAACATTTTTGTCCTCTGCCAAATCTTTAATGAGTTCAACTCAAGAAAACTAGAGAAACGGAACGTCTTTGAAGGCATCCTAAAGAATCATTTATTTCTATGGATCGTGGGAGTAACACTTGTTCTACAAGTTGTTATGGTAGAATTCTTAAAGAAATTTGCAAATACAGTGAATCTAAATGGTTGGCAGTGGGGACTTTGCATTGCAATTGCAGCAATTTCTTGGCCTATTGGTTGGATTGTCAAATTCTTGCCCGTTTCTGATAAGCCTTTCCTTAGCTACTTCAAATGGTTTTAA 3039 41.43 MSKCESTYHETLLLNISKARRRWRFAYAAIYSIRAMLSVAVTKRNGHYSSLNFENWQEDCYEEQIICTKDDQKKLIEMVKNKDKEAYHELGEGATIAASLGTNPENGIKDNSDILNEQRQIFGSNTYHKRPRKSFFHFVVEAFKDTTILILLVCAALALGFGIKEHGVQEGWYEGGSIFVAVALVVAVSAISNFRQEVQFEKLSKISNNIKVEVLRDGRRIQVSIFDIVVGDVVVLKLGDQIPADGLFLSGHSLQVDESSMTGESDHVELNTTENPFLLSGTKVVDGYGQMLVTSVGMDTAWGEMMSSISRDSEEQTPLQVRLNKLTTSIGKVGLSVALLVLVVMLARYFTGNTKDDFGNTEYNGRKTDIDDVLNAIIRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTKFWLGQEFIEEENSSNTIAEAVHELINQGVGLNTTGSVYRSSPESKTEISGSPTEKAILSWAVTEFGMDMEKLKKSYAILHVETFNSEKKRSGVLVRKLADNTIHQHWKGAAEMILSMCSSYFERNGKTYDLDIENRKKLENIIQGMAASSLRCIAFAYKQISEDEEKNGIPNVSNSKQDGYTLMGIVGIKDPCRPGVKKAVETCKSAGVSIKMITGDNIFTAKAIATECGILDFDHNTASRGEVIEGSEFRNYSSEERLRRVDQIKVMARSTPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFTTVATVLRWGRCVYNNIQKFIQFQLTVNVAALTINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPNDELMHKAPVGRTEPLITNIMWRNLLAQALYQITILLIFQFQGSTIFKVSAEVNDTLIFNIFVLCQIFNEFNSRKLEKRNVFEGILKNHLFLWIVGVTLVLQVVMVEFLKKFANTVNLNGWQWGLCIAIAAISWPIGWIVKFLPVSDKPFLSYFKWF 1012
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 6660862 6664429 - CmPI595203_09g007080.1 Cmu09g0708 423937
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0708 1012 SUPERFAMILY HAD-like 432 848 IPR036412 -
Cmu09g0708 1012 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 441 639 IPR023299 GO:0000166(InterPro)
Cmu09g0708 1012 FunFam Calcium-transporting ATPase 444 642 - -
Cmu09g0708 1012 Pfam Cation transporting ATPase, C-terminus 828 998 IPR006068 -
Cmu09g0708 1012 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 657 667 - -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 767 779 - -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 635 646 - -
Cmu09g0708 1012 PRINTS P-type cation-transporting ATPase superfamily signature 743 762 - -
Cmu09g0708 1012 Gene3D - 115 310 - -
Cmu09g0708 1012 CDD P-type_ATPase_Ca_PMCA-like 115 876 - -
Cmu09g0708 1012 Gene3D - 431 788 IPR023214 -
Cmu09g0708 1012 FunFam Calcium-transporting ATPase 187 310 - -
Cmu09g0708 1012 Pfam E1-E2 ATPase 210 412 - -
Cmu09g0708 1012 Gene3D - 141 997 - -
Cmu09g0708 1012 PRINTS H+-transporting ATPase (proton pump) signature 743 759 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 PRINTS H+-transporting ATPase (proton pump) signature 775 800 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 PRINTS H+-transporting ATPase (proton pump) signature 589 607 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 PANTHER CATION TRANSPORTING ATPASE 61 1001 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cmu09g0708 1012 SMART Cation_ATPase_N_a_2 86 163 IPR004014 -
Cmu09g0708 1012 Pfam Cation transporter/ATPase, N-terminus 94 157 IPR004014 -
Cmu09g0708 1012 FunFam Calcium-transporting ATPase 760 1002 - -
Cmu09g0708 1012 SFLD Haloacid Dehalogenase 416 796 - -
Cmu09g0708 1012 SUPERFAMILY Calcium ATPase, transmembrane domain M 94 1000 IPR023298 -
Cmu09g0708 1012 Gene3D - 444 642 IPR023299 GO:0000166(InterPro)
Cmu09g0708 1012 NCBIfam HAD-IC family P-type ATPase 714 823 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 NCBIfam HAD-IC family P-type ATPase 376 476 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 NCBIfam HAD-IC family P-type ATPase 178 351 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cmu09g0708 1012 SUPERFAMILY Calcium ATPase, transduction domain A 209 308 IPR008250 -
Cmu09g0708 1012 Pfam haloacid dehalogenase-like hydrolase 432 757 - -
Cmu09g0708 1012 NCBIfam calcium-translocating P-type ATPase, PMCA-type 57 1000 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cmu09g0708 1012 SFLD p-type atpase 416 796 IPR044492 -
Cmu09g0708 1012 FunFam Calcium-transporting ATPase 636 788 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1600 Cmu-Chr8:27650947 Cmu09g0708 Cmu-Chr9:6660862 8.30E-86 dispersed
Cmu09g0074 Cmu-Chr9:926484 Cmu09g0708 Cmu-Chr9:6660862 3.60E-11 dispersed
Cmu09g0708 Cmu-Chr9:6660862 Cmu10g2319 Cmu-Chr10:29444762 9.80E-233 dispersed
Cmu09g0151 Cmu-Chr9:1665535 Cmu09g0708 Cmu-Chr9:6660862 1.10E-266 transposed
Cmu11g1166 Cmu-Chr11:22254297 Cmu09g0708 Cmu-Chr9:6660862 2.30E-291 transposed
Cmu02g1647 Cmu-Chr2:30313471 Cmu09g0708 Cmu-Chr9:6660862 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0708 K01537 - csv:101220140 1790.78