Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0715 | ATGGCGAACAATCATTCCGATACTCCGGCTGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGTTCATCGGACCAAGGGTTAGCTGGAACTGACGGCGGATTGGCCGGAGCTGCTGCTGCTGCGGCAGCGGCGGCGGCTCAGGGTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGCGACGGTGGTGGTCATATCGCTACGATTGGGAGTGGTAGTGTCGGTGGAGCTGGGTTTCATGGCGGACCCCCTTTTCCTCTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCCTCTGGAAGTGGAAAGCGGTATTGTGGTGATGTTGTTGATGTTCGAGCTTCGTCTGTAAAAAATGTTTTTCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCCCCACATCCACCAGCAATGCGCCCTAGGGTACGTGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTGAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGTGGTAGGAACCAACCGGCATGGGAGAAGTGGTCGAACGATGGTACAGAGAGACAAGTTGCTAAACTCATGGAAGAAAATGTGGGAGCCGCAATGCAATTCCTTCAATCAAAGGCACTCTGCATCATGCCCATCTCGTTGGCTTCAGCGATTTATCACACGCAACCACCTGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAACCCTCCTCCATAG | 942 | 51.8 | MANNHSDTPADDFLEQILGISPFGSSDQGLAGTDGGLAGAAAAAAAAAAQGQAPMMLQLSSGDGGGHIATIGSGSVGGAGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGDVVDVRASSVKNVFQGQQMHATMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPP | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6719025 | 6721986 | + | CmPI595203_09g007150.1 | Cmu09g0715 | 423944 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0715 | 313 | Gene3D | - | 152 | 214 | IPR036638 | GO:0046983(InterPro) | |
Cmu09g0715 | 313 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 155 | 216 | IPR036638 | GO:0046983(InterPro) | |
Cmu09g0715 | 313 | Pfam | Helix-loop-helix DNA-binding domain | 162 | 207 | IPR011598 | GO:0046983(InterPro) | |
Cmu09g0715 | 313 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 98 | 292 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cmu09g0715 | 313 | FunFam | Basic helix-loop-helix transcription factor | 152 | 214 | - | - | |
Cmu09g0715 | 313 | MobiDBLite | consensus disorder prediction | 237 | 256 | - | - | |
Cmu09g0715 | 313 | MobiDBLite | consensus disorder prediction | 138 | 161 | - | - | |
Cmu09g0715 | 313 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 157 | 206 | IPR011598 | GO:0046983(InterPro) | |
Cmu09g0715 | 313 | SMART | finulus | 163 | 212 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1699 | Cmu-Chr2:30872259 | Cmu09g0715 | Cmu-Chr9:6719025 | 6.10E-43 | dispersed | |
Cmu06g1282 | Cmu-Chr6:23956548 | Cmu09g0715 | Cmu-Chr9:6719025 | 1.50E-46 | dispersed | |
Cmu07g0083 | Cmu-Chr7:707324 | Cmu09g0715 | Cmu-Chr9:6719025 | 3.50E-17 | dispersed | |
Cmu09g0715 | Cmu-Chr9:6719025 | Cmu09g0819 | Cmu-Chr9:7926626 | 3.00E-15 | dispersed | |
Cmu09g0715 | Cmu-Chr9:6719025 | Cmu03g2230 | Cmu-Chr3:30934821 | 2.10E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6809 | PF00010 | HLH | 1.20E-07 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0715 | - | - | - | 0.0 |