Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0771 ATGGCAGCCTCTTCTTCTTCTCCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCTCCTTATTTCCGCCACGAGCTCGGTGCCTCCCAATTCTCTGCCATCCACAAAGTTTTCGGTGCAAGCAATGCTTCCAAGCTTCTCGCTCACCTCCCAGTCTCCCACCGTTGCGAAGCGGCGGTGACGATCTCATACGAAGCTCAAGCGAGACTTCAAGATCCGATCTACGGTTGTGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCTTACGAAAAATCTTCATTTTATTCCGACGACCCATTACTAGATCTTCAAAGTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCGCCGGAGTTTGAATCTGCAGCGGTGCCGTACTTTGAGATGAGCGTCGTCGATTCAAATCTCGCCGGAGATTTCTGTTGCTAA 555 48.29 MAASSSSPSSPPCGACKFLRRKCVNGCIFAPYFRHELGASQFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSSFYSDDPLLDLQSWLLAESCSAAAPEFESAAVPYFEMSVVDSNLAGDFCC 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7339267 7340031 - CmPI595203_09g007710.1 Cmu09g0771 424000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0771 184 Coils Coil 92 112 - -
Cmu09g0771 184 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 125 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cmu09g0771 184 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cmu09g0771 184 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0147 Cmu-Chr7:1393721 Cmu09g0771 Cmu-Chr9:7339267 1.50E-38 dispersed
Cmu07g0148 Cmu-Chr7:1399554 Cmu09g0771 Cmu-Chr9:7339267 4.80E-44 dispersed
Cmu07g0390 Cmu-Chr7:3985140 Cmu09g0771 Cmu-Chr9:7339267 2.50E-32 dispersed
Cmu09g0771 Cmu-Chr9:7339267 Cmu10g2332 Cmu-Chr10:29591422 1.00E-34 dispersed
Cmu09g0771 Cmu-Chr9:7339267 Cmu06g0034 Cmu-Chr6:357722 5.10E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6819 PF03195 LOB 1.20E-34 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0771 K13945 - csv:101220863 335.109