Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu09g0773 | GACAAGCCTGCCAATATCGTTGTCGGTTCTCAAATATGGGTGGGAGATATAGATTCTGTTTGGATTGATGGACTCGTATTGAACATCACTGGGGAAGATGCTGAGATTCAGACTAGTGATGGGAGGCAGGTGGTTGTAAAAATGTCAAATCTATATCCAAGGGATGCAGAAGCTCCTACTACTGGAATTGACGATATGACTAGAATGTCATATTTGAATGAGCCCGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAACATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAGTCTGTATGATGCCCATGTGATGGAGCAGTACAAGGGGGCACCAATTGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGGAAAAGCAACTCCATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACCGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCTGAAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGAAACAATAATTCAAGCCGTTTTGGGAAATTCGTTGAGATCCAATTTGACAAGAAGGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTAGGAAATCCAAAATCATTTCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGATTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTCCATCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTGAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCCTTGCATTAGAAGATGCTCTTTGCAAGCGCATGATGATTACACCAGAGGACGTCATCAAGAGAAGTCTTGATCCACTTGGTGCAACAGTTAGCAGGGATGGATTAGCCAAGACAATATACTCTCGTTTGTTTGACTGGTTGGTAGATAAAATCAATTTTTCCATCGGACAAGATCCTGGCTCAAAATATCTGATCGGAGTACTTGATATTTATGGTTTTGAGAGCTTTCAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCACGTCTTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATAGAGTTTGTTGATAATCAAGATGTCCTCGATCTCATCGAGAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTCCCGAAATCAAATCATGAAACATTTTCACAAAAGCTATATCAGACCTTCAAAAATCATAAACGCTTCACCAAGCCAAAATTGGCCCGCTCAGATTTTACGATTGTTCATTATGCTGGAGATGTTCTATATCAGTCAGATCAGTTTCTAGACAAAAATAAAGATTATGTTGTCCCTGAACATCAAGATTTGTTAAGTGCTTCAAAATGTTCTTTTGTTGCTGGCCTCTTCTCTCCTCATCCTGAGGAGACGGCCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGTTACAACTACAGCAGTTGATGGAAACGTTAAATTCAACCGAACCCCATTATATAAGATGTGTGAAGCCCAATACTGTCCTGCAACCTGCCATCTTTGAGAATGCTACTGTTATGCAACAATTACGTTCTGGAGGTGTTTTGGAGGCAATTAGAATCAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAGAAGGCAGCGTGCGAAAAGATTCTAGAGAAGATGGGACTTAAAGGTTATCTGATAGGGAAATCAAAAATTTTCCTAAGAGGTAATTTAATGGCCGAACTAGATGCACAAAGAACAGGAATATATAGTGCTGCTGCTATACTTATACAGAAGCATTTCAGAGCTCGAAATGATTGTAAAAAGTACATTGCCATGCGAAGAGCCTGCATTCGTCTACAATCATATTGGAGAGGTGTTCTTGCCCGTGAGTCATATGAAATTAGGAGAAGGGAAGCAGCTGCCGTCAAAATTCAAAAGAATGTTCGTGCATACCTTGCCAGGAGCCGTCATATTAAAATGAGGATCTCTACAGTTTTTCTTCAGGCTGGTATGCGTGCAATGGTTGCTCGGAGTGAATACAGAAACAGGAGGCAGGTTAAGGCTGCAAAAGTTATTCAATCTTATTGGCGTCAGTATAGAACCTCGTCGAGGTATAAGACGGTTAAAAAATCATCAACCAATTCACAATGCGGATTGTACTCAAAAACTTCTGGTGAAGGTCTTAAGAAGCAAAGGATGGCTAACTTGGAAGAAACAAAGGAGGATCTGGTTTTGCCTGCGTTGCTCAACAGCAGTACAGACACCATTGATGAAACAATTGAAATGATTGCCATGGAAAGCCGTGTTTCTCCACAAGAAATAGAAGAAGCATACTTTATTATTAAAGAGCCCGGTAGTCCAGTTGAAGGTGCAGATAAGGTGGTCACTCTCAGAGCAGAAGTGGCTAATCTAAAGGCCAAGTTGCAGGCTGAAAGGCAAAGAGCTAATGAGTATGAAAGGAAGTATGCTGTAATGCAGAAAGCAAATGAGGAAGGACGTAGAAAACTAAAAAAAACCGAAAGGAAGGTGCATCAACTTCAGGACTACATAAACAGGATGATACATTGCATGTCAAACCAAATCTCGGAGATGAAAATGATCGTGGGTACTTCTAGATCGGATGCATCTAGTTCTTCTCGGAATGAGGTTCTGACGGATGCCACATCCAGTTGCTCTGATTCATCATCAGAAGACTTCACCTTTCCTGTTCCAAGTCCATCTATACCAACTTTCTCTTCATTCGGTACCAATACTTTTCAGCTGATTGTGCAGGATATTTCAGCTGCAGAAATTCCAGGATCTGACAGTGACAGGGAAGGGGGATTTTCTGACTACTTCTAA | 3276 | 40.51 | DKPANIVVGSQIWVGDIDSVWIDGLVLNITGEDAEIQTSDGRQVVVKMSNLYPRDAEAPTTGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISSLYDAHVMEQYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDEESKFHLHMTAELLMCDPLALEDALCKRMMITPEDVIKRSLDPLGATVSRDGLAKTIYSRLFDWLVDKINFSIGQDPGSKYLIGVLDIYGFESFQTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSNHETFSQKLYQTFKNHKRFTKPKLARSDFTIVHYAGDVLYQSDQFLDKNKDYVVPEHQDLLSASKCSFVAGLFSPHPEETAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNTVLQPAIFENATVMQQLRSGGVLEAIRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEKAACEKILEKMGLKGYLIGKSKIFLRGNLMAELDAQRTGIYSAAAILIQKHFRARNDCKKYIAMRRACIRLQSYWRGVLARESYEIRRREAAAVKIQKNVRAYLARSRHIKMRISTVFLQAGMRAMVARSEYRNRRQVKAAKVIQSYWRQYRTSSRYKTVKKSSTNSQCGLYSKTSGEGLKKQRMANLEETKEDLVLPALLNSSTDTIDETIEMIAMESRVSPQEIEEAYFIIKEPGSPVEGADKVVTLRAEVANLKAKLQAERQRANEYERKYAVMQKANEEGRRKLKKTERKVHQLQDYINRMIHCMSNQISEMKMIVGTSRSDASSSSRNEVLTDATSSCSDSSSEDFTFPVPSPSIPTFSSFGTNTFQLIVQDISAAEIPGSDSDREGGFSDYF | 1091 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 7370205 | 7389793 | - | CmPI595203_09g007730.1 | Cmu09g0773 | 424002 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu09g0773 | 1091 | Gene3D | - | 734 | 783 | - | - | |
| Cmu09g0773 | 1091 | Gene3D | - | 784 | 835 | - | - | |
| Cmu09g0773 | 1091 | Pfam | Myosin head (motor domain) | 64 | 719 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | Gene3D | - | 665 | 732 | - | - | |
| Cmu09g0773 | 1091 | Coils | Coil | 939 | 994 | - | - | |
| Cmu09g0773 | 1091 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 784 | IPR027417 | - | |
| Cmu09g0773 | 1091 | ProSiteProfiles | IQ motif profile. | 782 | 809 | - | - | |
| Cmu09g0773 | 1091 | Gene3D | - | 438 | 622 | - | - | |
| Cmu09g0773 | 1091 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 311 | 600 | - | - | |
| Cmu09g0773 | 1091 | CDD | MYSc_Myo11 | 75 | 719 | IPR036018 | - | |
| Cmu09g0773 | 1091 | SMART | iq_5 | 756 | 778 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | SMART | iq_5 | 781 | 803 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | SMART | iq_5 | 733 | 755 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | SMART | iq_5 | 804 | 826 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | SMART | iq_5 | 829 | 851 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | PANTHER | MYOSIN | 39 | 1022 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cmu09g0773 | 1091 | ProSiteProfiles | IQ motif profile. | 805 | 834 | - | - | |
| Cmu09g0773 | 1091 | SMART | MYSc_2a | 55 | 732 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | Gene3D | Kinesin motor domain | 64 | 661 | IPR036961 | - | |
| Cmu09g0773 | 1091 | FunFam | Myosin heavy chain | 251 | 306 | - | - | |
| Cmu09g0773 | 1091 | FunFam | Myosin 2 | 311 | 424 | - | - | |
| Cmu09g0773 | 1091 | MobiDBLite | consensus disorder prediction | 1017 | 1043 | - | - | |
| Cmu09g0773 | 1091 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 7 | 56 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | ProSiteProfiles | IQ motif profile. | 830 | 859 | - | - | |
| Cmu09g0773 | 1091 | Gene3D | - | 251 | 309 | - | - | |
| Cmu09g0773 | 1091 | Pfam | IQ calmodulin-binding motif | 758 | 777 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | Pfam | IQ calmodulin-binding motif | 832 | 851 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | Pfam | IQ calmodulin-binding motif | 784 | 802 | IPR000048 | GO:0005515(InterPro) | |
| Cmu09g0773 | 1091 | PRINTS | Myosin heavy chain signature | 91 | 110 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | PRINTS | Myosin heavy chain signature | 195 | 222 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | PRINTS | Myosin heavy chain signature | 148 | 173 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | PRINTS | Myosin heavy chain signature | 428 | 456 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | PRINTS | Myosin heavy chain signature | 481 | 509 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | ProSiteProfiles | Myosin motor domain profile. | 61 | 731 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cmu09g0773 | 1091 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 783 | 856 | IPR027417 | - | |
| Cmu09g0773 | 1091 | ProSiteProfiles | IQ motif profile. | 757 | 786 | - | - | |
| Cmu09g0773 | 1091 | FunFam | Class V myosin | 438 | 579 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu09g0342 | Cmu-Chr9:3279348 | Cmu09g0773 | Cmu-Chr9:7370205 | 0.00E+00 | dispersed | |
| Cmu09g0773 | Cmu-Chr9:7370205 | Cmu11g1838 | Cmu-Chr11:30550965 | 1.10E-136 | dispersed | |
| Cmu09g0773 | Cmu-Chr9:7370205 | Cmu06g0131 | Cmu-Chr6:1279213 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu09g0773 | K10357 | - | csv:101220626 | 2015.35 |