Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0815 ATGGATGAAGATTTTGATATCCCTGCTGCCGCTGACATGAACGAGGACTTGGATCTTCCTGATGATACCATAGCTCTCAAGGTTGGGGAGGAGAAAGAAATTGGAAATCAAGGCTTGAAGAAGAAGCTTCTCAAAGAAGGTGAAGGATGGGTAACTCCTGAAAATGGCGATGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTTGATTCCAGCCGCGATCGTGGAACCCCGTTTAAGTTCACTCTTGGTCAAGGACAAGTGATCAAAGGATGGGATTTGGGTATCAAAACAATGAAGAAAAATGAAAAAGCTCTTTTTACCATTCCTCCTGATTTGGCATATGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCGACATTGCAGTTCGATGTCGAGTTACTATCTTGGACAAGCGTTAAGGACATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGACAAATGGGATAATCCAAAGGACCTTGATGAAGTGCTAGTCAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGTTGGGGATGGTTACTTTTGCCCTGCTCTCGCAAAGGCTGTAAAAACCATGAAGATAGGTGAAAAGGCACTCCTCACAGTGAAGCCACAATATGGGTTTGGGGAGAAAGGTAAATCAGCCTCTAGTAATGAAGGTGCAGTTCCACCAAATGCATCCCTCGATATTACTTTGGAGTTGGTATCTTGGAAGACTGTTTCAGAAGTTACCCCTGACAAAAAGGTTATCAAGAAAATTCTGAAAGAAGGAGAAGGTTATGAGAAGCCAAATGACGGAGCCATTGTCAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCAAGATATTTTTGAGGAAGGGATATGATGATGGTGAAGAGCCATTTGAGTTTAAAACAGACGAGGAACAAGTGATTGATGGCCTCGACAAAGCTGTGGCGACAATGAAGAAAGGTGAGATAGCCTTGCTGACAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAACAGGATTTGGCTATAGTTCCTCCAAACTCAACTGTGAATTACGAGGTTGAGCTTGTGGCTTTTGACAAGGAGAAAGAGTCATGGGATATGAATAACCAGGAAAAGATTGAAGCTGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTCAAGTCTGGAAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGTGAAGAAGAGAAAAAGCAGGCTAAGGCATTGAAAGTTGCATGCAATTTGAACAATGCGGCTTGTAAATTGAAGCTAAAGATGTACAACGAGGCAGAGAAATTGTGCACCAAGGTGCTAGAACTTGAGAGTTCAAATGTTAAGGCTCTCTATAGAAGGGCTCAAGCATATATCCAACTAGCTGACTTGGATTTAGCTGAATTTGACATCAAGAAGGCTCTCGATATCGATCCGAATAACAGGGATGTGAAATTGGAATACAAAACTCTGAAGGAGAAGGTGAAGGAATACAATAAAAAGGATGCCAAGTTTTACGGCAACATTGGCAACGTTAGTCGTTAG 1647 42.08 MDEDFDIPAAADMNEDLDLPDDTIALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKNEKALFTIPPDLAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILTEGDKWDNPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVGDGYFCPALAKAVKTMKIGEKALLTVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKTVSEVTPDKKVIKKILKEGEGYEKPNDGAIVKVKLIGKLGDGKIFLRKGYDDGEEPFEFKTDEEQVIDGLDKAVATMKKGEIALLTIAPEYAFGSSESQQDLAIVPPNSTVNYEVELVAFDKEKESWDMNNQEKIEAAGKKKEEGNVLFKSGKFARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKMYNEAEKLCTKVLELESSNVKALYRRAQAYIQLADLDLAEFDIKKALDIDPNNRDVKLEYKTLKEKVKEYNKKDAKFYGNIGNVSR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7888246 7892440 + CmPI595203_09g008150.1 Cmu09g0815 424044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0815 548 FunFam Peptidylprolyl isomerase 387 542 - -
Cmu09g0815 548 Gene3D - 28 147 IPR046357 GO:0003755(InterPro)
Cmu09g0815 548 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515(InterPro)
Cmu09g0815 548 FunFam Peptidylprolyl isomerase 148 261 - -
Cmu09g0815 548 SUPERFAMILY TPR-like 387 540 IPR011990 GO:0005515(InterPro)
Cmu09g0815 548 SUPERFAMILY FKBP-like 33 148 - -
Cmu09g0815 548 Gene3D - 262 383 IPR046357 GO:0003755(InterPro)
Cmu09g0815 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 PANTHER PEPTIDYLPROLYL ISOMERASE 31 143 IPR050754 -
Cmu09g0815 548 FunFam Peptidylprolyl isomerase 29 147 - -
Cmu09g0815 548 Coils Coil 515 535 - -
Cmu09g0815 548 Gene3D - 148 261 IPR046357 GO:0003755(InterPro)
Cmu09g0815 548 SUPERFAMILY FKBP-like 148 264 - -
Cmu09g0815 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 257 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 SUPERFAMILY FKBP-like 264 399 - -
Cmu09g0815 548 FunFam Peptidylprolyl isomerase 262 384 - -
Cmu09g0815 548 Pfam Tetratricopeptide repeat 482 515 IPR019734 GO:0005515(InterPro)
Cmu09g0815 548 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515(InterPro)
Cmu09g0815 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755(InterPro)
Cmu09g0815 548 SMART tpr_5 399 432 IPR019734 GO:0005515(InterPro)
Cmu09g0815 548 SMART tpr_5 482 515 IPR019734 GO:0005515(InterPro)
Cmu09g0815 548 SMART tpr_5 448 481 IPR019734 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0791 Cmu-Chr5:6985976 Cmu09g0815 Cmu-Chr9:7888246 6.80E-239 dispersed
Cmu07g1494 Cmu-Chr7:30068466 Cmu09g0815 Cmu-Chr9:7888246 2.80E-10 dispersed
Cmu09g0815 Cmu-Chr9:7888246 Cmu11g0683 Cmu-Chr11:7516076 4.20E-20 dispersed
Cmu09g0815 Cmu-Chr9:7888246 Cmu05g0836 Cmu-Chr5:7550294 8.70E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0815 K09571 - csv:101214513 1027.31