Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0823 ATGAACGATGTGAGAGGTCAAGAACAAATTCCTGAATTAGATTTTGGAAAATTGGAAGTGGTGACGGCGCTCGGCCGGGGAGCGAAGGGAGTCGTGTTCTTGGCTCGAAATGCGGCAGGGGATGACGACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGAGAATTAATCGAGAGGAAGGCCAAGATTGTGAATAGCGATGGAGCTGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTGCGGCTTTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACTCAGAAAGTTGTAGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATACTCTCAGGAAAAAACAGACCGAAAAAATGTTCTCCGACGACGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGTCTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAATGTTATGGTTCAACACAGCGGCCATATAATGCTTGTGGATTTTGATCTCTCTACCAGACTCTCTCAAAAATCTCCGAAATCGTCTCCGTCTCCGTCGCCGTCGCCATCGCCATCGCCGGCGGTAGAGGTTTTGGCGGAGTCTAAATTCGCGATGAATGAAAAGATTAACAAGAAAAAGAACAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCGTATCACCGGAGGAATCCGAACATCAGGCTACGGCCGCGGAGAAACCAAGATCGCAGCCGGAGTCGCCGGATTCGGAGTCGTCGGAGAAGTCGAACTCGTTCGTGGGAACAGAGGACTACGTGGCACCGGAAATCGTTGCCGGGAAGGGTCATGACTTCGCCGTGGACTGGTGGTCACTCGGCGTAGTTCTGTACGAGATGCTGTACGGAACGACGCCATTTAGGGGCTCGAATCGGAAGGAAACATTCTACCGGATTCTAACGAAAACGCCGGATCTGTGCGGCGAAGCGACGGCGTTAAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGAAGAAGAGAATCGAACTGGAGGAAATCAAGGGCCACGATTTCTTTAAAGGGACTGACTGGGATTTAGTTCTGGAAATGCCCCGGCCGCCGTCGCTACCTGAAATGGCGGAAGAGGACATAAATGGAAATAACTTAATTGATGTGGAGTCTTTTGTACAAGACGTATTTTGCAGAGAAATGGAGAAGAAGAATCAAATTAACGGTGATGAAGGAAAAGGGTTAATTCCTAATTACACGGACTCTGACACATTTCATGTATTCTAA 1299 47.58 MNDVRGQEQIPELDFGKLEVVTALGRGAKGVVFLARNAAGDDDGEWLALKVISRELIERKAKIVNSDGAEYRRVCFEREVLRLFRHPLLPRLRGVLNTQKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHSGHIMLVDFDLSTRLSQKSPKSSPSPSPSPSPSPAVEVLAESKFAMNEKINKKKNKKRFFHFHRFCNSGVSPEESEHQATAAEKPRSQPESPDSESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPKKRIELEEIKGHDFFKGTDWDLVLEMPRPPSLPEMAEEDINGNNLIDVESFVQDVFCREMEKKNQINGDEGKGLIPNYTDSDTFHVF 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8031519 8032914 + CmPI595203_09g008230.1 Cmu09g0823 424052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0823 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0823 432 MobiDBLite consensus disorder prediction 241 257 - -
Cmu09g0823 432 FunFam Serine/threonine-protein kinase OXI1 262 379 - -
Cmu09g0823 432 ProSiteProfiles Protein kinase domain profile. 18 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0823 432 Gene3D Transferase(Phosphotransferase) domain 1 113 183 - -
Cmu09g0823 432 Gene3D Transferase(Phosphotransferase) domain 1 260 379 - -
Cmu09g0823 432 SMART serkin_6 18 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0823 432 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Cmu09g0823 432 Pfam Protein kinase domain 259 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0823 432 Pfam Protein kinase domain 19 187 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0823 432 FunFam Serine/threonine-protein kinase OXI1 113 181 - -
Cmu09g0823 432 MobiDBLite consensus disorder prediction 179 200 - -
Cmu09g0823 432 MobiDBLite consensus disorder prediction 234 267 - -
Cmu09g0823 432 PANTHER FLIPPASE KINASE 1-RELATED 9 383 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cmu09g0823 432 SUPERFAMILY Protein kinase-like (PK-like) 16 386 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2316 Cmu-Chr2:36715557 Cmu09g0823 Cmu-Chr9:8031519 2.80E-77 dispersed
Cmu09g0823 Cmu-Chr9:8031519 Cmu10g2144 Cmu-Chr10:27438753 6.60E-53 dispersed
Cmu09g0823 Cmu-Chr9:8031519 Cmu04g1024 Cmu-Chr4:24838821 6.80E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75786 PF00069 Pkinase 4.80E-30 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0823 K20714 - csv:101223223 664.455