Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0840 ATGCTCTTCCAAGACGGCGTGACTTGTTTGGATTCACATGGTATAGCTATGCTATGCTCATGCTGCCCTAGAGTATCTGATGAAGGAAATCAGAAGAAGCCAAATAATCATATCGACGCCTTCCACAATGTTCTTTGTATCGCTATGGAAAACACTAAACTTTCATTACCTCTCTTTGCTGCTTTACTCCTCACAAATGCTATTGTTGTTTTAGCCAATTCCAATGAGAATAGTGACATGAATAATAACTCGAGTGTCATAGAAAACTCATGTGCCATTACTCTTTATCCTCAACTATGTCAATCAACAATATACTCCATCGTCGGAACATCCAACTTGTTGAGTTTGAAAGATATTGTTGAAGTGTCATTGAGTGTTGCTGTTGATGCAGCTAAGCATAACTACAAAAGCATCAACAAACTTTGGATGTCACTTAATGATGTTAGTAAACGAGACAAGATTGCGCTTCGTGATTGTGTGGAAACCACAGACAGGGCGATTTATGAACTTCACAAGGCCGTAGAGGATCTTCGTGAGTATCCCAACAAGAAATCTCTTACCTTGTACGCTGATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGAGACTTGTTTGGAGGGATTGTCACATGAGAAAAGGGTGTTGAAGCTGATTGAAAGCACACATATTCACGTCACAAAGTTGTGTAGTAATACATTGGCTTTGGTTAAGAAATTGACACACACTCATTTTACAAATCAAAAAACCAATAAAATAACCTCTGACCACCCCACAATTGTTCTCTTTTCCCACCCTGTCGATCAGGAGGAAGGTGAGAATAGAGGAATTAGGGAGGATTTAGAAGACGGAATAAAGTGGCCAGAATGGATGGCGAGCCGTGACCGGAGGCTTTTGGAGTCATCGTACGAAGCTACGGCGGACGTGGTGGTGGCGGCGGATGGAAGTGGAAATTATAAAACGGTGTCGGAGGCGGTGGCGGCGGCGCCGAGTAAGAGCAGCAAAAGATATGTAATAAGAATAAAGGGTGGAGTTTACAAGGAAAATGTTGATGTGCCAAGTAGTAAAACCAATATTATGTTTTGGGGAGATGGAAGATCCAACACCATTATCACTGCTAGCAGAAGTGTTGGGGGTGGCAGTACAACCTTCAATTCCGCCACAGTTGCTGCTGTGGGGGATGGATTTTTAGCTCGGGATATAACCTTTCAAAACACAGCAGGAGCAGCCAATGACCAAGCTGTAGCTCTCCGTGTTGGGTCAGATCGCTCAGCCTTCTACCGTTGTGGCATGCTAGCCTACCAAGACACTCTCTACGTCCATTCAAACCGTCAGTTCTTCGTCAACTGCGTCGTTGCAGGCACAGTCGATTTCATCTTCGGAAACGCAGCAGTCGTATTCCAAAACTCCGACCTCACCCCTCGCAAACCAGGCCCTAAGCAACAGAACATGGTCACAGCACAAGGAAGAACTGACCCGAATCAAAACACGGGAATCGTGATCCAAAAGTGTAAAATAAAAGCGACGTCGGACTTGGAGCCGGTGATAAAAGAATTCCCAAGCTTCCTTGGGAGGCCATGGAAGGATTATGCTAGGGTTGTGGTAATGCAAACGGACATAACCAATGTGATAGACTCAAAAGGGTGGGCGCCATGGGGTAGTGAAATAAAGAAACCCTACTTTGCGGAATATGATAATAATGGAGCTGGAGCCAATACTTGTTGTAGAGTGACATGGTCTACAATTATTAATGCAGCTCAAGCTAAGACCTTTACGGCTGAACCATTCATAGATGGTGCTAATTGGCTCCCATCCACTGGCTTCCCCTATCAGCTTGGCCTCTAA 1851 44.35 MLFQDGVTCLDSHGIAMLCSCCPRVSDEGNQKKPNNHIDAFHNVLCIAMENTKLSLPLFAALLLTNAIVVLANSNENSDMNNNSSVIENSCAITLYPQLCQSTIYSIVGTSNLLSLKDIVEVSLSVAVDAAKHNYKSINKLWMSLNDVSKRDKIALRDCVETTDRAIYELHKAVEDLREYPNKKSLTLYADDLKTFLSSAITNQETCLEGLSHEKRVLKLIESTHIHVTKLCSNTLALVKKLTHTHFTNQKTNKITSDHPTIVLFSHPVDQEEGENRGIREDLEDGIKWPEWMASRDRRLLESSYEATADVVVAADGSGNYKTVSEAVAAAPSKSSKRYVIRIKGGVYKENVDVPSSKTNIMFWGDGRSNTIITASRSVGGGSTTFNSATVAAVGDGFLARDITFQNTAGAANDQAVALRVGSDRSAFYRCGMLAYQDTLYVHSNRQFFVNCVVAGTVDFIFGNAAVVFQNSDLTPRKPGPKQQNMVTAQGRTDPNQNTGIVIQKCKIKATSDLEPVIKEFPSFLGRPWKDYARVVVMQTDITNVIDSKGWAPWGSEIKKPYFAEYDNNGAGANTCCRVTWSTIINAAQAKTFTAEPFIDGANWLPSTGFPYQLGL 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8206021 8211911 + CmPI595203_09g008400.1 Cmu09g0840 424069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0840 616 FunFam Pectinesterase 83 243 - -
Cmu09g0840 616 NCBIfam pectinesterase inhibitor domain 59 243 IPR006501 GO:0004857(InterPro)
Cmu09g0840 616 ProSitePatterns Pectinesterase signature 1. 335 354 IPR018040 -
Cmu09g0840 616 SMART PMEI_2 82 238 IPR006501 GO:0004857(InterPro)
Cmu09g0840 616 Pfam Plant invertase/pectin methylesterase inhibitor 86 238 IPR006501 GO:0004857(InterPro)
Cmu09g0840 616 FunFam Pectinesterase 304 616 - -
Cmu09g0840 616 Pfam Pectinesterase 310 601 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cmu09g0840 616 MobiDBLite consensus disorder prediction 474 494 - -
Cmu09g0840 616 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 244 IPR035513 -
Cmu09g0840 616 SUPERFAMILY Pectin lyase-like 307 615 IPR011050 -
Cmu09g0840 616 PANTHER PECTINESTERASE 61 607 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cmu09g0840 616 CDD PMEI-like_3 90 243 - -
Cmu09g0840 616 Gene3D - 304 616 IPR012334 -
Cmu09g0840 616 ProSitePatterns Pectinesterase signature 2. 454 463 IPR033131 -
Cmu09g0840 616 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 243 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0137 Cmu-Chr9:1534782 Cmu09g0840 Cmu-Chr9:8206021 3.90E-173 dispersed
Cmu09g0840 Cmu-Chr9:8206021 Cmu11g0015 Cmu-Chr11:603102 2.30E-91 dispersed
Cmu09g0840 Cmu-Chr9:8206021 Cmu07g1407 Cmu-Chr7:29305664 1.30E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0840 K01051 - csv:101221055 848.966