Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0923 TGCTTAGGAATTTGTTGTTGCATCTTAACGATTTTACTGGTTACACTTGTCTTGGCAGTTGTCAGTGCCAAGCTAGCTGCCCCTGCTCAAAAAGGTTTACCTTCTCAGTCTATAAAGTCACAAGATATTGAAAACAAAAAGAAGCAGGACGAGGTTGAGGTTGCCGCCAAGGGCAAAAGAAAAGATGATGCTGTTAAGAAAAAAGCTTCAGTCCCAGATGCTACTCCTGTACCACAGGAAGAAAATCTTCGCTCGCCCATATGTTGTATTATGGGTCATGTTGATACTGGTAAAACCAAGCTGCTGGACTGTATCCGTGGTACAAATGTTCAAGAGGGAGAGGCGGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCCGAGAACATTCGGGAAAGAACTAGGGAATTGAAGGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTATTATTGATACCCCTGGGCATGAGTCGTTTACAAACTTACGTTCTCGTGGTTCGGGCTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCCTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAATACAGAATTTATTGTTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCAATTCTTAAGACAATGAAGCAGCAAACCAAGGATGTGCAGAACGAGTTCAATATGAGGCTTATTCAGATTATTACTCAATTTAAAGAGCAGGGATTGAATACTGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACATGTTACTATTATTGGTGCAGTGGGCCCAGAGAACTATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGCACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAATGGTGTGTTGCATGAAGGAGATCAAATTGTTGTTTGTGGGATGCAGGGCCCAATTGTTACTACTATTCGAGCCCTATTGACGCCCCATCCAATGAAGGAACTCCGGGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATTAAAATAACTGGACAGGGTCTCGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATCAAGGATTCAGCTATGGAAGATATGAAGTCAGTCTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATATATCACTTGTTCGACCAATTCAAGGCCTATATTGATAATCTTAAGGAGGAAAAGAAGAAAGAAGCCGCTGAGGAAGCAGTTTTTCCTTGTGTTCTCAAAATTCTACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTGATTGAGGGCATTGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGAGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAACCACAAACCTGTTGATTATGCAAAGAAAGGGCAGAAGATTGCTATTAAGATAGTTGGGCACTCTTCGGAGGAGCAACAAAAGATGTATGGTAGACACTTTGATTTGGAGGACGAACTTGTCAGCCATATATCGAGGAAGTCCATTGACCTTCTCAAAGCGAACTACCGGGATGATTTGTCCACGGATGAGTGGAGACTCGTGGTGAAATTGAAGAATCTCTTCAAGATACAGTGA 2028 41.81 CLGICCCILTILLVTLVLAVVSAKLAAPAQKGLPSQSIKSQDIENKKKQDEVEVAAKGKRKDDAVKKKASVPDATPVPQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQTKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQRTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTDEWRLVVKLKNLFKIQ 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9180977 9191541 + CmPI595203_09g009230.1 Cmu09g0923 424152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0923 675 CDD IF2_eIF5B 86 296 - -
Cmu09g0923 675 NCBIfam small GTP-binding protein domain 88 214 IPR005225 GO:0005525(InterPro)
Cmu09g0923 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 374 IPR027417 -
Cmu09g0923 675 MobiDBLite consensus disorder prediction 36 78 - -
Cmu09g0923 675 FunFam eukaryotic translation initiation factor 5B 306 425 - -
Cmu09g0923 675 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 408 537 IPR036925 -
Cmu09g0923 675 Pfam Translation-initiation factor 2 412 524 IPR023115 -
Cmu09g0923 675 MobiDBLite consensus disorder prediction 41 69 - -
Cmu09g0923 675 SUPERFAMILY Translation proteins 542 674 IPR009000 -
Cmu09g0923 675 Pfam Elongation factor Tu domain 4 545 618 IPR029459 -
Cmu09g0923 675 FunFam Eukaryotic translation initiation factor 5B 425 531 - -
Cmu09g0923 675 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 83 299 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 34 674 IPR015760 GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER)
Cmu09g0923 675 FunFam Eukaryotic translation initiation factor 5B 538 675 - -
Cmu09g0923 675 Pfam Elongation factor Tu domain 2 322 397 IPR004161 GO:0005525(InterPro)
Cmu09g0923 675 Gene3D - 78 305 IPR027417 -
Cmu09g0923 675 Gene3D Translation factors 538 675 - -
Cmu09g0923 675 PRINTS GTP-binding elongation factor signature 87 100 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 PRINTS GTP-binding elongation factor signature 151 161 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 PRINTS GTP-binding elongation factor signature 203 212 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 PRINTS GTP-binding elongation factor signature 167 178 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 CDD aeIF5B_II 307 417 - -
Cmu09g0923 675 Pfam Elongation factor Tu GTP binding domain 86 295 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu09g0923 675 Coils Coil 520 540 - -
Cmu09g0923 675 Gene3D Translation factors 306 424 - -
Cmu09g0923 675 FunFam Eukaryotic translation initiation factor 5B 77 305 - -
Cmu09g0923 675 CDD IF2_aeIF5B_IV 546 641 - -
Cmu09g0923 675 Gene3D - 425 531 IPR036925 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0923 Cmu-Chr9:9180977 Cmu11g1622 Cmu-Chr11:28493685 5.00E-23 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0923 K03243 - csv:101204360 1239.56