Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0924 ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCATGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCGGTCCTTGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTTATAAGGCAGTATAGGCTCCGGCTCGGGGTGGTGGTGGTGGCAGTCACAGTGGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACCATCAGGTCCATAGTGAGGGTCTTGATTGGTGGGTGGGCAGCCATGGCTGTAACTTTTGGATTGACTAAGTTGATTGGATCGAGTGGATTATGA 651 54.84 MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRQYRLRLGVVVVAVTVALVGFGWLGAALGKAPTIRSIVRVLIGGWAAMAVTFGLTKLIGSSGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9194621 9195271 - CmPI595203_09g009240.1 Cmu09g0924 424153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0924 216 Coils Coil 103 123 - -
Cmu09g0924 216 MobiDBLite consensus disorder prediction 1 15 - -
Cmu09g0924 216 Pfam VIT family 116 208 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cmu09g0924 216 Pfam VIT family 42 125 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cmu09g0924 216 MobiDBLite consensus disorder prediction 1 22 - -
Cmu09g0924 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 213 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0641 Cmu-Chr8:18625649 Cmu09g0924 Cmu-Chr9:9194621 1.30E-73 dispersed
Cmu09g0924 Cmu-Chr9:9194621 Cmu09g1420 Cmu-Chr9:23774122 6.80E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0924 K22736 - csv:101210510 365.925