Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0925 ATGCTGATGGAACCCAATTTCTCGTCGGCGAAGCCACCGCAGCCGGCGGCGATGGACATCGAACAGATGTCGGAGAATCCTCACCGTGGTTCCCACCACCGCCGCTCCCACTCCGACACTTCCTTCCGCTTCCCAAACCTCGACGAACTTCTCTTCTTCGACCCTTCAGAGCTCGACCTCTCGATGCTCTCTTCCCCTTCTTCTCCACCTCCTGGCGGCACTGCCATGGCAGTTGATTCGTCTAATGCTAAGTTTTCTGATGACGCCGTTCGCCCTAAGCCGGAGCCGATTGCCTCTGGACCATTCGGTGGTCACTTGCGGAGCTTGTCCATGGACTCTGATTTCTTCAAGAATCTGGACCTTGGTGGTGATAGTGGGGAGATCGATTCTTTGGGGAAGAAGACTCCGGCGAGTGAACAGCGGCCAGTTCGTCATCGACATAGCCTGTCCATGGATGGTTCTTCGTCGTCGTTTGAGGCCGATTCAACCCTAGTGATTGATGGAGTGAAGAAAGCAATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTAGCGAACAGACAATCTGCAGCTCGTTCGAAAGAGAGGAAGATACGGTACACGAATGAGCTGGAGAGAAAGGTTCAGACTCTGCAGTCCGAAGCTACCACTCTGTCTGCGCAGGTGACGATTCTACAGAGAGATACAAGTGGATTAACTGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAACAAGCACAACTTCGAGATGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGGCTTAGAATAGCTGCAGGCCAGGTTGCATCGATCAATGGAAATCTTTTCAACCGACCTCCTCAATATCCTTCATCCCGGCCACCTGTACACCATTTTAGTAGCTCCCATGCCCAGCAGGGTCAACAGCAGCAGCCACCATCCATGTTGGCTACCAACCAGCAGCAGCAATCAGATCCCAAATGGACAAACTCGTCTCAGCTTCTCAGTCGAAGTCCGGATGGCCAAGCAAAGCCTTAG 1062 52.17 MLMEPNFSSAKPPQPAAMDIEQMSENPHRGSHHRRSHSDTSFRFPNLDELLFFDPSELDLSMLSSPSSPPPGGTAMAVDSSNAKFSDDAVRPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPASEQRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGQVASINGNLFNRPPQYPSSRPPVHHFSSSHAQQGQQQQPPSMLATNQQQQSDPKWTNSSQLLSRSPDGQAKP 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9222130 9225310 + CmPI595203_09g009250.1 Cmu09g0925 424154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0925 353 SMART brlzneu 183 247 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g0925 353 Pfam bZIP transcription factor 187 239 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g0925 353 Gene3D - 186 239 - -
Cmu09g0925 353 MobiDBLite consensus disorder prediction 288 353 - -
Cmu09g0925 353 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g0925 353 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 337 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cmu09g0925 353 Coils Coil 210 230 - -
Cmu09g0925 353 Coils Coil 238 258 - -
Cmu09g0925 353 MobiDBLite consensus disorder prediction 1 41 - -
Cmu09g0925 353 MobiDBLite consensus disorder prediction 84 104 - -
Cmu09g0925 353 FunFam Transcription factor VIP1 186 239 - -
Cmu09g0925 353 MobiDBLite consensus disorder prediction 126 157 - -
Cmu09g0925 353 MobiDBLite consensus disorder prediction 302 347 - -
Cmu09g0925 353 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g0925 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0640 Cmu-Chr8:18607063 Cmu09g0925 Cmu-Chr9:9222130 3.90E-88 dispersed
Cmu09g0925 Cmu-Chr9:9222130 Cmu11g1766 Cmu-Chr11:29790159 3.60E-09 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6831 PF00170 bZIP_1 1.10E-07 CL0018 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0925 K20557 - csv:101207973 588.186