Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0964 | ATGGCCTTCAGTTCTACAGTAGCATCGCAGCTCCATGTTTTCCGAACCTCCAATCTCCGATTCCCGGACTCCAACAAATCCTGGAGTCGGAGACGGCGAAGCACAGCGGTCTCCGTAATCCGGTGCGAGAAGGTCGTGGGAATCGACCTAGGAACGACGAACTCAGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACGATCGTGACGAACGCGGAGGGACAGAGGACGACGCCGTCGGTGGTAGCGTACACGAGGAACGGCGATCGGCTTGTTGGTCAGTTGGCGAAGCGGCAGGCGGTGGTTAATCCGGAGAACACTTTCTTCTCCGTGAAGAGGTTCATTGGAAGGAAAATGGCGGAGGTGGACGAAGAGGCAAAGCAAGTGTCTTACAAGGTTATCGCCGATGAGAATGGGAATGTGAAGCTCGATTGCCCTGCCGTCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAATGATCAAGTAGGAAAAGCTGTAGTAACGGTACCAGCATATTTCAATGACTCTCAAAGAACAGCGACGAAAGATGCTGGTCGCATTGCTGGTCTCGAAGTTCTTCGCATCATCAATGAACCAACTGCTGCTTCACTTGCCTATGGCTTTGACAAGAAAACCAATGAGACCATTCTCGTTTTCGACCTCGGCGGTGGAACGTTTGACGTCTCAGTCCTTGAGGTTGGAGATGGCGTATTTGAGGTGCTTTCTACTTCAGGCGATACACATTTGGGTGGAGATGATTTTGACAAGAGGATTGTCGATTGGCTCGCCGAGAGCTTTAAGAGGGATGAAGGAATTGATCTTCTGAAAGACAAACAAGCGCTGCAACGTTTAACGGAAACTGCTGAGAAGGCAAAGATTGAGTTATCATCTTTAACACAGACCAATATTAGTTTGCCATTTATCACTGCAACCAGCGACGGCCCCAAACATATTGATACTACGCTTACTAGGGTCAAGTTTGAAGAGTTATGTTCAGACTTGCTAGATAGGCTGCGATCACCGGTTGAAACGGCTCTAAAGGATGCAAAGTTGTCGTTCAAAGATATAGATGAAGTCATTCTTGTTGGGGGCTCGACTCGTATACCAGCAGTTCAGGAGCTTGTCAAGAAAATGACAGGGAAAGAACCGAATATGACTGTAAATCCTGATGAAGTGGTTGCTCTCGGGGCCGCAGTTCAGGCTGGTGTTTTGGCTGGAGATGTCAGTGACATTGTTCTCTTAGATGTCACACCTCTCTCTCTCGGTTTGGAAACTTTAGGTGGAGTGATGACCAAAATCATTCCAAGGAACACAACCTTACCCACATCCAAATCGGAGGTGTTTTCGACAGCAGCAGATGGACAAACAAGTGTTGAGATTAACGTATGTCAAGGCGAACGAGAGTTTGTTCGGGACAATAAGTCTCTCGGACGAATTCTCCTGGACGGTATCCCACCCGCACCTCGTGGTGTTCCTCAGATTGAAGTGAAATTTGACATTGATGCTAATGGCATTCTCTCTGTAACTGCCATTGACAAGGGAACCGGGAAGAAGCAGGACATCACAATCACTGGCGCTAGTACTTTACCAAGTGATGAGGTGGACAGAATGGTTAAAGAAGCAGAGAGGTTTGCAAAGGAAGACAAGGAGAAGAGGGATGCCATAGACACAAAGAACCAAGCAGATTCTGTTGTGTACCAAACTGAAAAACAGCTAAAGGAGCTGGAAGACAAAATTCCCACCTCGGTTCGAGATACCGTTGAGGCTAAGCTCAAAGAACTTAAGGATGCCATCTCTAACGGGTCAACTGAAACTATCAAAAACTCCATGGCTGCACTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTATAGCCAGGCAACGGCCTCGAGTGATGGGACTGCGTCAGGAACTCAGTCTACTTCATCAGGATCAGCCGGAGAAACTGATGGGGATGTTGTTGATGCAGATTTTGTGGATAGTGACCGCGATCGTCTCTCTTCTCCTTCACCGTTCTTACCTTGGACCTCTTCATCTTCTTCTCCGGCGAACGCACAAGGTGCTCCGGCGTCTTCTCCTTGCGCGCAAGCGTTTTGCAGACGGGGACCAGACCACGTCAACTTCTGTAGCGTGATCCAGCCACGGTCGAAGACCAATCCAGGACCTCCGGCGATCTGTTGGCAGCAATCACGCGACTTGAACACCTTGCAGAAGCATTTTTCTTCTTTCGCCAAGGTAGCATCTGCTTCTAGTGTCTGTTTTGTATCTTTTAAGATGCTTCCTCTTTCGCTCCTAAAGACTGCTCAAGGTCACCCAATGTTGGTGGAGTTGAAAAATGGTGAGACTTACAACGGCCATTTGGTTAATTGTGATACATGGATGAACATTCATCTTCGGGAAGTCATCTGCACTTCAAAAGATGGTGACCGGTTTTGGCGAATGCCTGAATGTTATATCCGTGGTAATACAATCAAGTATTTGCGAGTTCCAGATGAGGTTATCGATAAAGTTCAGGAAGAAGCCAAAAGCCGTGCAGATAGGAAACCTCCAGTGTTAGGGCGTGGAAGAGGAAGAGGGCGTGAGGATGGTCCTGGTGGAAGACCAGCCAAAGGAATGGGCCGAGGCTTTGATGATGGTGCCAAAGCTGCTTCTGGAGGCCGTGGAAAAGGTGGCCCTGGTGGAAAACCTGGTGGCAACAGAGTTGGAGGCAGGGGCCGAGGGTGA | 2769 | 49.08 | MAFSSTVASQLHVFRTSNLRFPDSNKSWSRRRRSTAVSVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTRNGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVIADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATSDGPKHIDTTLTRVKFEELCSDLLDRLRSPVETALKDAKLSFKDIDEVILVGGSTRIPAVQELVKKMTGKEPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRILLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELEDKIPTSVRDTVEAKLKELKDAISNGSTETIKNSMAALNQEVMQMGQSLYSQATASSDGTASGTQSTSSGSAGETDGDVVDADFVDSDRDRLSSPSPFLPWTSSSSSPANAQGAPASSPCAQAFCRRGPDHVNFCSVIQPRSKTNPGPPAICWQQSRDLNTLQKHFSSFAKVASASSVCFVSFKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGGNRVGGRGRG | 922 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9715936 | 9728176 | + | CmPI595203_09g009640.1 | Cmu09g0964 | 424193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0964 | 922 | Gene3D | - | 46 | 415 | - | - | |
Cmu09g0964 | 922 | MobiDBLite | consensus disorder prediction | 639 | 663 | - | - | |
Cmu09g0964 | 922 | FunFam | Molecular chaperone DnaK | 265 | 352 | - | - | |
Cmu09g0964 | 922 | SUPERFAMILY | Actin-like ATPase domain | 44 | 224 | IPR043129 | - | |
Cmu09g0964 | 922 | SUPERFAMILY | Actin-like ATPase domain | 227 | 418 | IPR043129 | - | |
Cmu09g0964 | 922 | Pfam | LSM domain | 779 | 843 | IPR001163 | - | |
Cmu09g0964 | 922 | SMART | Sm3 | 778 | 844 | IPR001163 | - | |
Cmu09g0964 | 922 | Coils | Coil | 572 | 592 | - | - | |
Cmu09g0964 | 922 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 232 | 245 | IPR018181 | - | |
Cmu09g0964 | 922 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 420 | 576 | IPR029047 | - | |
Cmu09g0964 | 922 | MobiDBLite | consensus disorder prediction | 685 | 703 | - | - | |
Cmu09g0964 | 922 | Hamap | Chaperone protein DnaK [dnaK]. | 42 | 676 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
Cmu09g0964 | 922 | Gene3D | - | 221 | 402 | - | - | |
Cmu09g0964 | 922 | CDD | LSm4 | 775 | 850 | IPR034101 | GO:0000398(InterPro)|GO:0000956(InterPro) | |
Cmu09g0964 | 922 | MobiDBLite | consensus disorder prediction | 854 | 922 | - | - | |
Cmu09g0964 | 922 | SUPERFAMILY | Sm-like ribonucleoproteins | 776 | 894 | IPR010920 | - | |
Cmu09g0964 | 922 | Coils | Coil | 288 | 315 | - | - | |
Cmu09g0964 | 922 | CDD | HSPA9-Ssq1-like_NBD | 42 | 418 | - | - | |
Cmu09g0964 | 922 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 48 | 55 | IPR018181 | - | |
Cmu09g0964 | 922 | Gene3D | Actin; Chain A, domain 4 | 265 | 352 | - | - | |
Cmu09g0964 | 922 | MobiDBLite | consensus disorder prediction | 639 | 703 | - | - | |
Cmu09g0964 | 922 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 45 | 608 | IPR013126 | GO:0005524(InterPro)|GO:0009507(PANTHER)|GO:0140662(InterPro) | |
Cmu09g0964 | 922 | FunFam | Molecular chaperone DnaK | 543 | 644 | - | - | |
Cmu09g0964 | 922 | Pfam | Hsp70 protein | 45 | 639 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Cmu09g0964 | 922 | MobiDBLite | consensus disorder prediction | 854 | 882 | - | - | |
Cmu09g0964 | 922 | Gene3D | - | 543 | 643 | IPR029048 | - | |
Cmu09g0964 | 922 | FunFam | Chaperone protein DnaK HSP70 | 414 | 597 | - | - | |
Cmu09g0964 | 922 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 416 | 541 | IPR029047 | - | |
Cmu09g0964 | 922 | NCBIfam | molecular chaperone DnaK | 44 | 639 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
Cmu09g0964 | 922 | Gene3D | - | 774 | 856 | - | - | |
Cmu09g0964 | 922 | FunFam | U6 snRNA-associated Sm-like protein LSm4 | 774 | 856 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 238 | 248 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 401 | 421 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 44 | 57 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 179 | 199 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 95 | 103 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 505 | 521 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 424 | 443 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 72 | 84 | - | - | |
Cmu09g0964 | 922 | PRINTS | 70kDa heat shock protein signature | 370 | 386 | - | - | |
Cmu09g0964 | 922 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 373 | 387 | IPR018181 | - | |
Cmu09g0964 | 922 | ProSiteProfiles | Sm domain profile. | 775 | 848 | IPR047575 | GO:0003723(InterPro) | |
Cmu09g0964 | 922 | FunFam | Molecular chaperone DnaK | 46 | 232 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g1032 | Cmu-Chr6:18343369 | Cmu09g0964 | Cmu-Chr9:9715936 | 7.40E-304 | dispersed | |
Cmu09g0964 | Cmu-Chr9:9715936 | Cmu10g1767 | Cmu-Chr10:21780823 | 3.80E-183 | dispersed | |
Cmu09g0964 | Cmu-Chr9:9715936 | Cmu09g1914 | Cmu-Chr9:35190628 | 1.20E-139 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0964 | K03283 | - | csv:101212307 | 1212.59 |