Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0990 | ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAAACCCAATTCATCGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTTCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGACTTCCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCAAGAGAATAACTGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCCGCAAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCTACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTATCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGTTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTTTAGATCTTGTCAATACCATTGCGACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTAGAAGACCTTCTATCTGTTCCACAGTAG | 1188 | 44.11 | MIKQAHSLIQIPNETQFIGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKLCSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYTDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISKWIKSSNSSLILRHLELNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIATFRSQRIGMVQTLDQYFFCYRTIVDELEDLLSVPQ | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9993769 | 9999441 | + | CmPI595203_09g009900.1 | Cmu09g0990 | 424219 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0990 | 395 | SMART | PTPc_3 | 116 | 388 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | Pfam | Protein-tyrosine phosphatase | 146 | 384 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 302 | 377 | IPR000387 | GO:0016311(InterPro) | |
Cmu09g0990 | 395 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 117 | 386 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 53 | 387 | IPR050348 | GO:0004725(PANTHER) | |
Cmu09g0990 | 395 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 323 | 333 | IPR016130 | GO:0016311(InterPro) | |
Cmu09g0990 | 395 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 93 | 389 | IPR029021 | - | |
Cmu09g0990 | 395 | MobiDBLite | consensus disorder prediction | 65 | 80 | - | - | |
Cmu09g0990 | 395 | CDD | PTPc_plant_PTP1 | 178 | 380 | - | - | |
Cmu09g0990 | 395 | Gene3D | Protein tyrosine phosphatase superfamily | 93 | 392 | IPR029021 | - | |
Cmu09g0990 | 395 | SMART | ptp_7 | 283 | 385 | IPR003595 | - | |
Cmu09g0990 | 395 | FunFam | Tyrosine-protein phosphatase non-receptor type 12 | 94 | 393 | - | - | |
Cmu09g0990 | 395 | MobiDBLite | consensus disorder prediction | 47 | 87 | - | - | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 320 | 338 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 282 | 299 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 177 | 184 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 353 | 368 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 369 | 379 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cmu09g0990 | 395 | PRINTS | Protein tyrosine phosphatase signature | 195 | 215 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0990 | - | - | - | 0.0 |