Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g1023 | ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTATGGAATACCATGACACAAAAACTTTAGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACCTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACAAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTAGTCAATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATCGTCAAAGGAATCGCAAGAGGACTCGAATACTTACACGAAACCGTCAGTCTTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGGACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGAATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGAGGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCTCATTCATTCTACCCAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGACAATGATATTGATCTGTGTTTTGAGCATATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGGTAAATCCGTTCAGTTCTTTGAGTTTTCTTGCTTTTTGTGATGTTGTGTTGGCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGGAAAATTATCAGCACATTTTTTCTACAGTAATGGTTTCAGAGGAAGGGAAGGGGCTTTTTGGGTTGTACCCTGCATCCTCATTTTTTCCTTCTCATTCAAAAAGTGTTGTTTTATTTGCGTTGCTCTGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGCGCATGCTGA | 2193 | 40.86 | MSWFQCCMSEERVNRNALKKSIMEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNKNLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADANQRILVYEYMANDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSLPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTGQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSESELSCSYSCSTSPDRRSDIGGKNVGVEGDGRGEWARITTRGFSFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLTMILICVLSIYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQVNPFSSLSFLAFCDVVLAVELAYYYSVTRIFYSLSEGKLSAHFFYSNGFRGREGAFWVVPCILIFSFSFKKCCFICVALANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC | 730 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10316235 | 10329182 | - | CmPI595203_09g010230.1 | Cmu09g1023 | 424252 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g1023 | 730 | ProSiteProfiles | small GTPase Rho family profile. | 429 | 706 | - | - | |
Cmu09g1023 | 730 | MobiDBLite | consensus disorder prediction | 355 | 392 | - | - | |
Cmu09g1023 | 730 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 342 | IPR011009 | - | |
Cmu09g1023 | 730 | PRINTS | Transforming protein P21 ras signature | 496 | 518 | - | - | |
Cmu09g1023 | 730 | PRINTS | Transforming protein P21 ras signature | 478 | 494 | - | - | |
Cmu09g1023 | 730 | PRINTS | Transforming protein P21 ras signature | 437 | 458 | - | - | |
Cmu09g1023 | 730 | SMART | rab_sub_5 | 437 | 704 | - | - | |
Cmu09g1023 | 730 | Pfam | Protein kinase domain | 79 | 341 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1023 | 730 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1023 | 730 | CDD | Rab7 | 437 | 707 | - | - | |
Cmu09g1023 | 730 | PANTHER | OS07G0668900 PROTEIN | 43 | 366 | - | - | |
Cmu09g1023 | 730 | FunFam | Serine/threonine-protein kinase PBS1 | 151 | 363 | - | - | |
Cmu09g1023 | 730 | Pfam | Ras family | 639 | 701 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu09g1023 | 730 | Pfam | Ras family | 469 | 557 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu09g1023 | 730 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524(InterPro) | |
Cmu09g1023 | 730 | CDD | STKc_IRAK | 84 | 345 | - | - | |
Cmu09g1023 | 730 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 372 | - | - | |
Cmu09g1023 | 730 | MobiDBLite | consensus disorder prediction | 368 | 386 | - | - | |
Cmu09g1023 | 730 | ProSiteProfiles | small GTPase Rab1 family profile. | 432 | 730 | - | - | |
Cmu09g1023 | 730 | Gene3D | - | 430 | 574 | IPR027417 | - | |
Cmu09g1023 | 730 | ProSiteProfiles | small GTPase Ras family profile. | 431 | 730 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu09g1023 | 730 | FunFam | probable serine/threonine-protein kinase RLCKVII | 50 | 154 | - | - | |
Cmu09g1023 | 730 | Gene3D | - | 611 | 715 | IPR027417 | - | |
Cmu09g1023 | 730 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 431 | 707 | IPR027417 | - | |
Cmu09g1023 | 730 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 152 | - | - | |
Cmu09g1023 | 730 | ProSiteProfiles | Protein kinase domain profile. | 78 | 347 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1023 | 730 | SMART | rho_sub_3 | 439 | 704 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu09g1023 | 730 | SMART | ras_sub_4 | 434 | 704 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu09g0194 | Cmu-Chr9:2059428 | Cmu09g1023 | Cmu-Chr9:10316235 | 3.80E-75 | dispersed | |
Cmu09g1023 | Cmu-Chr9:10316235 | Cmu10g1360 | Cmu-Chr10:6560225 | 5.50E-169 | dispersed | |
Cmu11g1767 | Cmu-Chr11:29804425 | Cmu09g1023 | Cmu-Chr9:10316235 | 4.80E-20 | dispersed | |
Cmu09g1023 | Cmu-Chr9:10316235 | Cmu05g0647 | Cmu-Chr5:5533543 | 9.20E-124 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75793 | PF00069 | Pkinase | 1.50E-43 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g1023 | - | - | - | 0.0 |