Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g1034 | ATGGTGAAAAGCTTACAAGGCGGAGGGCAAAACCTCCCGGCGGACGTGACGCAGGTGATTGATCAATTGGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCGTCTCCAAGCCGGCCCACTACGATCTGCAGCTCGCGAGAGAAGAAATGTCGAGGGAAAGATTGCGTTATTTGGAAGCCATGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTACCAACAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGACGTTCACGCTCTTTATCCACAACTAGGCTTGAAGAATTCGCCTCAGGTTTATGAGACCCTTGAGCACCGAATGGTTGTGGCAGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGATGGTGAAATCCAGGAGGAAGAGATTGAGAAGTTGAGTTTAGTATCTCGAAGTTCCCTTGATAGTACAAGCACGGGTGTAACAATCAGCTCAAGTGCTAATTCAACAAATTATACAAGTGCTAGCAGTACCGGAAGCATTGTGAACAATAGTCTTTCAGTAAGCTCAACTGAAACTGCAGAACCTGGAGTTGGTGGTGTTCCCAATCGCTTTCTTGGAATCACACCTGCCTTTTTATGGCAAACACAGCTCCATCAAACGCCTTCCATGGATATGGCCGAATATCAAATGGCTCTTTCCCGCGAGATTGATGCTCGTTTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTGTGATGGATGATATTGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCAGAGAGAGTCAAGTTGATCATTGAGGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGTAGACAGAAAGTTTGCTGAATATTACAATGTTCTTGAGCAGATATTGGGAGTACTAATTAAGCTTGTCAAAGATTTGAAGCTGCAGCATCAACATAAATATGACGATCTCCAGAAAACATGGCTGTGTAAAAGGTGTGAGACCATGAATGCGAAACTGAGCGTTTTAGAGCACGTTCTCCTGCTTGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTTACTCGTCTCCGCGAGTATCAAGGCGTAGACCCTCATTTCGACACAATTGCGAGGCAGTACCATGATATTGTAATGAAACTTGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAGTCAAAAGATTCCAGCTCAATCCAACGGACTGTTGCCGCCTTCCTCAAAAATCTCTATAAATACTTCCCGTTCCCTCTCATAATCATTTCATCCTTCCTTCTTTCCTCTCTTTTCACGCGTTCTTCGTTCTTTCGCCTTCTGATTTTCAGCTGTCCGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA | 1764 | 44.22 | MVKSLQGGGQNLPADVTQVIDQLERHCLAPDGSLVSKPAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEEYQQAVSMANLGGVRDVHALYPQLGLKNSPQVYETLEHRMVVAEASQRLRLPLISKDGEIQEEEIEKLSLVSRSSLDSTSTGVTISSSANSTNYTSASSTGSIVNNSLSVSSTETAEPGVGGVPNRFLGITPAFLWQTQLHQTPSMDMAEYQMALSREIDARLKTKCDKVADAFVMDDIESSSGHHSSSARLPERVKLIIEEIEREEAALRQELYSVDRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDDLQKTWLCKRCETMNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSKDSSSIQRTVAAFLKNLYKYFPFPLIIISSFLLSSLFTRSSFFRLLIFSCPIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF | 587 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10416046 | 10424222 | - | CmPI595203_09g010340.1 | Cmu09g1034 | 424263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g1034 | 587 | FunFam | Eukaryotic translation initiation factor SUI1 | 478 | 587 | - | - | |
Cmu09g1034 | 587 | PANTHER | AUGMIN SUBUNIT 4 FAMILY MEMBER | 5 | 425 | IPR029327 | GO:0051011(PANTHER)|GO:0051225(InterPro)|GO:0051225(PANTHER)|GO:0070652(InterPro)|GO:0070652(PANTHER) | |
Cmu09g1034 | 587 | Coils | Coil | 272 | 292 | - | - | |
Cmu09g1034 | 587 | Gene3D | - | 479 | 587 | - | - | |
Cmu09g1034 | 587 | CDD | eIF1_SUI1 | 503 | 586 | IPR005874 | GO:0003743(InterPro) | |
Cmu09g1034 | 587 | MobiDBLite | consensus disorder prediction | 151 | 171 | - | - | |
Cmu09g1034 | 587 | Pfam | Translation initiation factor SUI1 | 502 | 575 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu09g1034 | 587 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 505 | 575 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu09g1034 | 587 | NCBIfam | translation initiation factor SUI1 | 485 | 587 | IPR005874 | GO:0003743(InterPro) | |
Cmu09g1034 | 587 | SUPERFAMILY | eIF1-like | 479 | 587 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu09g1034 | 587 | Pfam | HAUS augmin-like complex subunit 4 | 188 | 422 | IPR029327 | GO:0051225(InterPro)|GO:0070652(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0184 | Cmu-Chr2:1739788 | Cmu09g1034 | Cmu-Chr9:10416046 | 2.10E-42 | dispersed | |
Cmu09g1034 | Cmu-Chr9:10416046 | Cmu10g1344 | Cmu-Chr10:6395471 | 6.80E-53 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g1034 | K16587 | - | csv:101203307 | 783.482 |