Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1034 ATGGTGAAAAGCTTACAAGGCGGAGGGCAAAACCTCCCGGCGGACGTGACGCAGGTGATTGATCAATTGGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCGTCTCCAAGCCGGCCCACTACGATCTGCAGCTCGCGAGAGAAGAAATGTCGAGGGAAAGATTGCGTTATTTGGAAGCCATGGCAATCTATTGTGAAGCAATTGCAATGGTGGAAGAGTACCAACAGGCTGTTTCAATGGCGAACCTTGGAGGAGTTCGAGACGTTCACGCTCTTTATCCACAACTAGGCTTGAAGAATTCGCCTCAGGTTTATGAGACCCTTGAGCACCGAATGGTTGTGGCAGAAGCATCTCAAAGATTGAGGCTTCCTCTTATATCAAAGGATGGTGAAATCCAGGAGGAAGAGATTGAGAAGTTGAGTTTAGTATCTCGAAGTTCCCTTGATAGTACAAGCACGGGTGTAACAATCAGCTCAAGTGCTAATTCAACAAATTATACAAGTGCTAGCAGTACCGGAAGCATTGTGAACAATAGTCTTTCAGTAAGCTCAACTGAAACTGCAGAACCTGGAGTTGGTGGTGTTCCCAATCGCTTTCTTGGAATCACACCTGCCTTTTTATGGCAAACACAGCTCCATCAAACGCCTTCCATGGATATGGCCGAATATCAAATGGCTCTTTCCCGCGAGATTGATGCTCGTTTGAAGACTAAATGTGATAAAGTAGCTGATGCTTTTGTGATGGATGATATTGAGTCATCATCTGGGCATCATAGCTCTAGTGCTCGGCTTCCAGAGAGAGTCAAGTTGATCATTGAGGAAATTGAAAGGGAAGAAGCAGCTTTACGGCAAGAGCTTTACTCGGTAGACAGAAAGTTTGCTGAATATTACAATGTTCTTGAGCAGATATTGGGAGTACTAATTAAGCTTGTCAAAGATTTGAAGCTGCAGCATCAACATAAATATGACGATCTCCAGAAAACATGGCTGTGTAAAAGGTGTGAGACCATGAATGCGAAACTGAGCGTTTTAGAGCACGTTCTCCTGCTTGAAACTTACACTCAGGAATCTATACCAGCCCTTCATAAAATAAGAAAATATCTTGTTGAAGCTACGGAGGAAGCTTCTATTTCTTATAACAAAGCAGTTACTCGTCTCCGCGAGTATCAAGGCGTAGACCCTCATTTCGACACAATTGCGAGGCAGTACCATGATATTGTAATGAAACTTGAGAATATGCAATGGACAATTCACCAAGTTGAGATGGACTTGAAACGCTTGCCAGATCAGTCAAAAGATTCCAGCTCAATCCAACGGACTGTTGCCGCCTTCCTCAAAAATCTCTATAAATACTTCCCGTTCCCTCTCATAATCATTTCATCCTTCCTTCTTTCCTCTCTTTTCACGCGTTCTTCGTTCTTTCGCCTTCTGATTTTCAGCTGTCCGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA 1764 44.22 MVKSLQGGGQNLPADVTQVIDQLERHCLAPDGSLVSKPAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEEYQQAVSMANLGGVRDVHALYPQLGLKNSPQVYETLEHRMVVAEASQRLRLPLISKDGEIQEEEIEKLSLVSRSSLDSTSTGVTISSSANSTNYTSASSTGSIVNNSLSVSSTETAEPGVGGVPNRFLGITPAFLWQTQLHQTPSMDMAEYQMALSREIDARLKTKCDKVADAFVMDDIESSSGHHSSSARLPERVKLIIEEIEREEAALRQELYSVDRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDDLQKTWLCKRCETMNAKLSVLEHVLLLETYTQESIPALHKIRKYLVEATEEASISYNKAVTRLREYQGVDPHFDTIARQYHDIVMKLENMQWTIHQVEMDLKRLPDQSKDSSSIQRTVAAFLKNLYKYFPFPLIIISSFLLSSLFTRSSFFRLLIFSCPIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10416046 10424222 - CmPI595203_09g010340.1 Cmu09g1034 424263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1034 587 FunFam Eukaryotic translation initiation factor SUI1 478 587 - -
Cmu09g1034 587 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 5 425 IPR029327 GO:0051011(PANTHER)|GO:0051225(InterPro)|GO:0051225(PANTHER)|GO:0070652(InterPro)|GO:0070652(PANTHER)
Cmu09g1034 587 Coils Coil 272 292 - -
Cmu09g1034 587 Gene3D - 479 587 - -
Cmu09g1034 587 CDD eIF1_SUI1 503 586 IPR005874 GO:0003743(InterPro)
Cmu09g1034 587 MobiDBLite consensus disorder prediction 151 171 - -
Cmu09g1034 587 Pfam Translation initiation factor SUI1 502 575 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu09g1034 587 ProSiteProfiles Translation initiation factor SUI1 family profile. 505 575 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu09g1034 587 NCBIfam translation initiation factor SUI1 485 587 IPR005874 GO:0003743(InterPro)
Cmu09g1034 587 SUPERFAMILY eIF1-like 479 587 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu09g1034 587 Pfam HAUS augmin-like complex subunit 4 188 422 IPR029327 GO:0051225(InterPro)|GO:0070652(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0184 Cmu-Chr2:1739788 Cmu09g1034 Cmu-Chr9:10416046 2.10E-42 dispersed
Cmu09g1034 Cmu-Chr9:10416046 Cmu10g1344 Cmu-Chr10:6395471 6.80E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1034 K16587 - csv:101203307 783.482