Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1064 ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTACACAATTCGTGAAGTACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA 702 46.44 MTIDHHSDQTTDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10864755 10867147 + CmPI595203_09g010640.1 Cmu09g1064 424293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1064 233 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 230 IPR020422 GO:0006470(InterPro)
Cmu09g1064 233 Pfam Tyrosine phosphatase family 42 221 IPR004861 -
Cmu09g1064 233 Gene3D Protein tyrosine phosphatase superfamily 40 220 IPR029021 -
Cmu09g1064 233 PRINTS Plant and fungal dual specificity phosphatase signature 41 58 IPR020428 GO:0016791(InterPro)
Cmu09g1064 233 PRINTS Plant and fungal dual specificity phosphatase signature 78 91 IPR020428 GO:0016791(InterPro)
Cmu09g1064 233 PRINTS Plant and fungal dual specificity phosphatase signature 97 111 IPR020428 GO:0016791(InterPro)
Cmu09g1064 233 PRINTS Plant and fungal dual specificity phosphatase signature 144 158 IPR020428 GO:0016791(InterPro)
Cmu09g1064 233 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 218 IPR029021 -
Cmu09g1064 233 MobiDBLite consensus disorder prediction 1 23 - -
Cmu09g1064 233 ProSitePatterns Tyrosine specific protein phosphatases active site. 166 176 IPR016130 GO:0016311(InterPro)
Cmu09g1064 233 PANTHER TYROSINE-PROTEIN PHOSPHATASE 24 227 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Cmu09g1064 233 CDD PFA-DSP_Siw14 40 217 - -
Cmu09g1064 233 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1637 Cmu-Chr3:19133120 Cmu09g1064 Cmu-Chr9:10864755 2.30E-53 dispersed
Cmu02g1800 Cmu-Chr2:31878440 Cmu09g1064 Cmu-Chr9:10864755 5.10E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1064 K18045 - csv:101209768 354.755