Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1108 ATGGCTCAGACAAGAATCATGGGTGGCAGTGAGATGAATAAATCCACGAAGGAGGAATCCAAGACAACACCTGCCACTACACAGGAACAGTCTCCAAACACAAGCACTGGCACCGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACAAGCCCCCAGGCACACACATATATGTGGGGGGTACAGCCTATTATGCCCCCTTATGGAACCCCTCCACACCCGTATGTTGCAATGTATCCTCATGGTGGCATATATGCTCATCCGCCTATGCCTCCGGGATCATATCCTTACAGTCCTTTTGCCATAGCTTCTCCAAATGGCATTGCTGAGACTTCTGGGAATACTCCAGGCAACATGGAAGGGGAAGGTAAGCCATCTGAGCTGAAAGAAAAATTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAGCATGATAACTGGGAAGAACAATGAGCTTGGTAAACCATCAGGACCATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGCACAAGTGAAAGAAGTGGTGCTGACTCTGAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTAATGCATGGTTCTCAGAATGAAGGACATAGTCTTGCGCATCCATTGGTGAACCAAACAATGTCCATGATACCAATTCAAGCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACCCCAACGACTTCTGCCATCCCTTCATTGTGTGGGAAGGTCCCTTCGGCTCCGGTTCCAGGAGCTGTTGCTGCTGGGTCACGGGACAGCATTCTGTCCCAACCTTGGTTACAGGATGAAAGAGAGCTGAAAAGACAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGCAAACAGGCTGAATGCGATGAGCTGTCTCAGCGTGCGGAAGCTTTGAAGGAAGAAAATGCGAGTCTTAGATCTGAAGTGGATAGGATTAGGAGTGAGTATGAGCAACTTCTTTCAGAAAATGCCTCTCTCAAGAGGAGGCTTGGAGAAAGTGATGGAAATGAAGATCCAAGATCTGCCAAAGCCAAAGACGGCCAAAATTTGAATAAAGGTCACCATACATCCCGGACCCAACTTGCTAAAGGAACTGACCCGTGTCGTCTCGGGACTGTTGATTCTTACGGAGGCTTCATCTTTAACCCGAAGCTCTGTGTAATTTCGGGTGTAATCAGCGACGTTTCCGTCGTGATTCCGTCGGCCGGCGGTCTTCGGTCACCGGAACTGAGACACTGCCATGCACCTATCGATTCTAAGAGTTGCATTTCCGCTGGATTCTTTAGAGGTTGTTCATCATTTTGCATCCCAAAGTCTGGATCTAGTTTGGATAAATTTCGATTGAGGGGCTTAAGAATAAGAGCTTCAGATGATTCTCAGAATGTTTATCCAGTTGCACCTGTTCAATTTGAATCCCCAGTTGGCCAGCTATTGGCCCAGATTTTGCAATCCCACCCTCATTTGCTTCCTGCAACTGTGGATCAGCAACTTGATAACCTTCAAACACAGAGAGATTCGCAGACAGAAGAGACTCCTTCCTCATCTCAAGATCCTCTCTACAAGAGGATAGCTGAAGTGAAAGAGAAAGAAAGGCGAAAGACGTTGGAAGAGATATTATATTGCTTGATCGTTGGAAAGTTTGTGGAGAATGACATTTCAATGATCCCCAAGATAACAGAAACCTCTGATCCTACTGGCCGAGTTGATTTTTGGCCAAACCAAGAGCAGAAACTGGAATCTGTCCACTCTCCTGAGGCATTTGAAATGATTCAAAGTCACTTGTCTCTTGTCCTTGGAGACCGATTTGTCGGTCCCCTTACTTCCATTGTTGAAATGAGCAAAATAAAACTTGGGAAGCTATATGCGGCTTCTATAATGTATGGATACTTTCTCAAAAGAGTTGATCAACGTTTCCAACTCGAAAGGACCATGAAAACTCTTCCTGAAGCGTTTACAAAAGACTTTGATGAACCGATACCAGCAAATCAACTCTGGGATCCCGATTCCTTGATCATGATTCCACCTGATGATGAAGGGGTCGGCGACAGCCGGGGATTTATCAACGCTGATGAAAGCAAATCATATAGATTGCGATCCTATGTGATGTATTTGGATTCCGAGACACTTCAAAGATATGCAACATTGAGATCCAAAGAAGCTATATCTTTGATCGAAAAGCAGACTCAAGCATTGTTTGGAAAACCAGACATTAGGATAGCTGATGATGGTTCAATCGACACATTCAACGATGAAGTGATTTCTATTACATTCTCTGGGCTGACAAAGCTAGTACTGGAGGCTGTTGCGTTCGGATCATTCCTATGGGATGCAGAAAGCTATGTCGAATCAAAATACAACTTCATCAAAAGCTGA 2505 44.55 MAQTRIMGGSEMNKSTKEESKTTPATTQEQSPNTSTGTVNPEWSGFQAYSPIPPPGYLATSPQAHTYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPMPPGSYPYSPFAIASPNGIAETSGNTPGNMEGEGKPSELKEKLPIKRSKGSLGSLSMITGKNNELGKPSGPSANGVYSKSAESESEGTSERSGADSENDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSMIPIQASGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVPGAVAAGSRDSILSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRSEYEQLLSENASLKRRLGESDGNEDPRSAKAKDGQNLNKGHHTSRTQLAKGTDPCRLGTVDSYGGFIFNPKLCVISGVISDVSVVIPSAGGLRSPELRHCHAPIDSKSCISAGFFRGCSSFCIPKSGSSLDKFRLRGLRIRASDDSQNVYPVAPVQFESPVGQLLAQILQSHPHLLPATVDQQLDNLQTQRDSQTEETPSSSQDPLYKRIAEVKEKERRKTLEEILYCLIVGKFVENDISMIPKITETSDPTGRVDFWPNQEQKLESVHSPEAFEMIQSHLSLVLGDRFVGPLTSIVEMSKIKLGKLYAASIMYGYFLKRVDQRFQLERTMKTLPEAFTKDFDEPIPANQLWDPDSLIMIPPDDEGVGDSRGFINADESKSYRLRSYVMYLDSETLQRYATLRSKEAISLIEKQTQALFGKPDIRIADDGSIDTFNDEVISITFSGLTKLVLEAVAFGSFLWDAESYVESKYNFIKS 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11323078 11345746 + CmPI595203_09g011080.1 Cmu09g1108 424337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1108 834 MobiDBLite consensus disorder prediction 371 396 - -
Cmu09g1108 834 MobiDBLite consensus disorder prediction 19 45 - -
Cmu09g1108 834 MobiDBLite consensus disorder prediction 300 333 - -
Cmu09g1108 834 MobiDBLite consensus disorder prediction 368 408 - -
Cmu09g1108 834 MobiDBLite consensus disorder prediction 118 229 - -
Cmu09g1108 834 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 Gene3D - 308 363 - -
Cmu09g1108 834 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 SMART brlzneu 305 369 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 Coils Coil 318 373 - -
Cmu09g1108 834 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 MobiDBLite consensus disorder prediction 1 47 - -
Cmu09g1108 834 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 PANTHER EXPRESSED PROTEIN 459 833 IPR038925 -
Cmu09g1108 834 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu09g1108 834 Pfam G-box binding protein MFMR 7 101 IPR012900 -
Cmu09g1108 834 Pfam Protein of unknown function (DUF760) 563 688 IPR008479 -
Cmu09g1108 834 Pfam Disordered region downstream of MFMR 140 273 - -
Cmu09g1108 834 MobiDBLite consensus disorder prediction 151 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1870 Cmu-Chr1:32284212 Cmu09g1108 Cmu-Chr9:11323078 7.10E-32 dispersed
Cmu04g1080 Cmu-Chr4:25389376 Cmu09g1108 Cmu-Chr9:11323078 3.30E-92 transposed
Cmu04g1322 Cmu-Chr4:27542432 Cmu09g1108 Cmu-Chr9:11323078 4.50E-91 transposed
Cmu05g0121 Cmu-Chr5:1101480 Cmu09g1108 Cmu-Chr9:11323078 2.30E-27 transposed
Cmu09g0832 Cmu-Chr9:8143407 Cmu09g1108 Cmu-Chr9:11323078 2.40E-41 transposed
Cmu10g0976 Cmu-Chr10:1687103 Cmu09g1108 Cmu-Chr9:11323078 8.40E-119 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6843 PF16596 MFMR_assoc 1.90E-44 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1108 - - - 0.0