Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1113 ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGTTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATATCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCTTCTTCTTCATCATCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTCCACCAGACGCCATCACTTGACCCGCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTACCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCGCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGACAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATACGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGTGTGACAAATAATCCTCATCAAAAGCCTAATTTAGAATTCACATTAGGAAGGCCAATTTGA 1224 43.79 MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLLLLHHHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPI 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11461753 11466420 - CmPI595203_09g011130.1 Cmu09g1113 424342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1113 407 MobiDBLite consensus disorder prediction 11 32 - -
Cmu09g1113 407 Gene3D - 219 276 - -
Cmu09g1113 407 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 406 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro)
Cmu09g1113 407 MobiDBLite consensus disorder prediction 49 68 - -
Cmu09g1113 407 MobiDBLite consensus disorder prediction 1 32 - -
Cmu09g1113 407 SUPERFAMILY Homeodomain-like 217 273 IPR009057 -
Cmu09g1113 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 220 273 IPR006447 GO:0003677(InterPro)
Cmu09g1113 407 FunFam Myb family transcription factor 218 276 - -
Cmu09g1113 407 MobiDBLite consensus disorder prediction 350 376 - -
Cmu09g1113 407 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2006 Cmu-Chr5:29794654 Cmu09g1113 Cmu-Chr9:11461753 3.70E-30 dispersed
Cmu08g1485 Cmu-Chr8:26818348 Cmu09g1113 Cmu-Chr9:11461753 1.80E-32 dispersed
Cmu09g1113 Cmu-Chr9:11461753 Cmu11g0063 Cmu-Chr11:1131728 3.20E-17 dispersed
Cmu01g0838 Cmu-Chr1:9952387 Cmu09g1113 Cmu-Chr9:11461753 3.10E-33 transposed
Cmu05g1161 Cmu-Chr5:11147190 Cmu09g1113 Cmu-Chr9:11461753 4.70E-41 transposed
Cmu10g0982 Cmu-Chr10:1781283 Cmu09g1113 Cmu-Chr9:11461753 2.80E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6845 None None None None Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1113 - - - 0.0