Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g1156 | ATGGCTGGTCTGGATTTAGGCAATCGCTATATTCACCAACTTCAAAGGCCTAATTTCAACCTTCACCACCATCATCAGAACCACCACCATCCCGACTCTCAATCTGGTCATGATGATGAATCCCATCCTCCGTCAGAATTTGTCACCGCCGCAGACTCTACCGCACCTGCCACAGATATGGTGGCCTCTCGCCGACCACGCGGCCGTCCACCCGGTTCCAAAAACAAACCGAAGCCACCGGTCATCATAACCCGAGAAAGCGCCAATACCCTAAGGGCTCATATTCTTGAGGTTGGTAATGGCTGTGACGTCTTCGATAGCATCGCTACCTATGCTCGTCGTCGCCAGCGAGGGATCTGCATCTTGAGCGGTAGTGGAATGGTAATGAATGTCAACTTACGGCAACCGACGGCGACGGGGTCTGTGTTAACCCTACATGGAAGGTTTGAGATATTATCCCTTACTGGATCTTTCTTGCCGCCGCCTGCTCCTCCCGGCGCTACTAGTTTGACTATATACTTAGCCGGTGGGCAAGGGCAAGTGGTCGGTGGAAACGTTGTTGGGGAATTGGTGGCGGCAGGGCCAGTTACAATCATCGCGGCATCATTTACAAATGTAGCGTATGAGAGATTGCCACTAGAAGAACAAGAGCAAGAACAAGAACAAGAGCAAGATCAACTTCAGATGCAGCCACCAACGTCTCAGGGCGGCAGTAGCGGTGGAAACAATAACAACCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTCTAAATATGCAGAACCAAATTCAGCTACCATTTTGA | 816 | 50.37 | MAGLDLGNRYIHQLQRPNFNLHHHHQNHHHPDSQSGHDDESHPPSEFVTAADSTAPATDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSIATYARRRQRGICILSGSGMVMNVNLRQPTATGSVLTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEEQEQEQEQEQDQLQMQPPTSQGGSSGGNNNNPFPDPSSGLPFFNLPLNMQNQIQLPF | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12476026 | 12476841 | - | CmPI595203_09g011560.1 | Cmu09g1156 | 424385 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g1156 | 271 | CDD | DUF296 | 92 | 175 | IPR005175 | - | |
Cmu09g1156 | 271 | ProSiteProfiles | PPC domain profile profile. | 88 | 224 | IPR005175 | - | |
Cmu09g1156 | 271 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 28 | 263 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cmu09g1156 | 271 | Gene3D | - | 91 | 226 | - | - | |
Cmu09g1156 | 271 | MobiDBLite | consensus disorder prediction | 215 | 258 | - | - | |
Cmu09g1156 | 271 | MobiDBLite | consensus disorder prediction | 22 | 81 | - | - | |
Cmu09g1156 | 271 | PIRSF | ESCAROLA | 7 | 269 | IPR014476 | GO:0003680(InterPro) | |
Cmu09g1156 | 271 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Cmu09g1156 | 271 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 92 | 204 | IPR005175 | - | |
Cmu09g1156 | 271 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 88 | 217 | - | - | |
Cmu09g1156 | 271 | MobiDBLite | consensus disorder prediction | 223 | 258 | - | - | |
Cmu09g1156 | 271 | FunFam | AT-hook motif nuclear-localized protein | 91 | 219 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g0032 | Cmu-Chr6:337616 | Cmu09g1156 | Cmu-Chr9:12476026 | 4.70E-60 | dispersed | |
Cmu07g0391 | Cmu-Chr7:3988582 | Cmu09g1156 | Cmu-Chr9:12476026 | 7.40E-58 | dispersed | |
Cmu08g1111 | Cmu-Chr8:23471221 | Cmu09g1156 | Cmu-Chr9:12476026 | 2.00E-45 | dispersed | |
Cmu09g1156 | Cmu-Chr9:12476026 | Cmu11g0675 | Cmu-Chr11:7436826 | 8.60E-51 | dispersed | |
Cmu10g1022 | Cmu-Chr10:2183337 | Cmu09g1156 | Cmu-Chr9:12476026 | 1.30E-80 | wgd | |
Cmu05g0282 | Cmu-Chr5:2403443 | Cmu09g1156 | Cmu-Chr9:12476026 | 1.50E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g1156 | - | - | - | 0.0 |