Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1275 ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCGCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATTAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAAATCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTCACATTTCTAGAGAGCTCCGGCCTCGCTAAATACGGCACCGAGGCCTTTCTCGTCAACTTCACCGCCATCACCACCGTCATTTTTGCACTGTTTGTGATTTTGTCTGTTATTTCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA 699 47.21 MALAVKAFPFTVVSHVLAIVALILVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSANLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLVNFTAITTVIFALFVILSVISQPCVQEDNHGDYSAI 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15967538 15975885 + CmPI595203_09g012750.1 Cmu09g1275 424504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1275 232 CDD Cyt_b561_ACYB-1_like 42 183 - -
Cmu09g1275 232 PANTHER CYTOCHROME B561-RELATED 5 222 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Cmu09g1275 232 Gene3D - 2 226 - -
Cmu09g1275 232 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Cmu09g1275 232 FunFam Cytochrome b reductase 1 4 225 - -
Cmu09g1275 232 SMART 561_7 49 175 IPR006593 -
Cmu09g1275 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0651 Cmu-Chr1:7290063 Cmu09g1275 Cmu-Chr9:15967538 3.90E-49 dispersed
Cmu07g0690 Cmu-Chr7:13292615 Cmu09g1275 Cmu-Chr9:15967538 6.10E-47 dispersed
Cmu09g1275 Cmu-Chr9:15967538 Cmu11g0538 Cmu-Chr11:5877143 1.20E-53 dispersed
Cmu09g1275 Cmu-Chr9:15967538 Cmu05g2367 Cmu-Chr5:32879886 6.70E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1275 K08360 - csv:101209308 385.956