Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g1489 | ATGAGCCACAGTCCGACATCGTGCGTAGGGACACAGTCACCGATTGTCACCACCTCTGTTTGCTTGATTGTCTGCTCATCGTTTCTGGTCGTCGCAGCTATTCTGTCGTTTTTGGACCAACCTCTTTATCTTCGTCATGCCGCCGGGCGTCGTTTTGGTCGTCGTTTCCATCCACCACCGGAAGCCACCATTTGCTCGCTAGAAAAGAAAGCTACGGCAACTGAGCAATGGATTGCAGAGCTGGAGTCATTGTTTGAATACCTGAATTGTGAGGACCATTTTAAGGTCAGAGGAGTAGTTTTCATGCTTCGAGACGAGGCGCGAATGTGGTGGAGATCCATTGAAGCCTCAGAAGATCATGCCGAAGGACCCATGACTTGGGCAAGGTTTAAGGACCTCCTATACGACTACTATTTTCCCGACAAAGTGAAGGACGACAAGGAAATAGAGTTCCTGCATCTAACCGAGTTGTCTTGTTTTGCACCCGACCTGGTGAGTACGTCAGAGAGGAGGATTAAAAGGTTCATTAGGGGCTTGCGCGAGGAAATTAGAGGTGCGGTCGCCTTAAAGGAGCCAATGACTTTTGCTGCAGCACTTAAGGCGGCACTGATCATGGACAAAAATATGGCCAAGAAACCTCAGGTGACACACTCACGTTGGGAGGTTGGCGCCTCATCTAGATTTAAAAGAAAGTCTCCCCCAGCTTCGTCAGATCAAACTTCCAAGGCCCATCGTCTGGCCTCGGGGCAAGCTACCACCCTCCCATTGTGCGGCTCATGCAACAAGCGTCACTTGGAGCAGTGCTGGCTAGGCCAGAGCATTTGCTTTAAGTGTGGAAAGGAAGGAGGGAAACAAAAGGCACGCATCTTTGCACTGAAGAAGGAGGAGGCTGCAGATACGAACGCAATGGTTACAGCGCCTTATTATCAAATGATCTGTGGAGAGATGAGAAGCAATGAAATGGGGAGAGCAACGTTGATGTTTTCAGCGTTTTCTCCTTTCCTGCGCTTAATTTTGGCTATGGCTTTCGTTTTACGGGTGTCTGCAAATGGGGAAGGTGATGCCCTAAATGCCTTCAAGTTGAGTTTGGTTGACCCCAACAATGTCTTGCAAAGTTGGAATACCATTCTTATGAATCCTTGCACATGGTTTCATGTTACATGTGATGAAAAAGAAAGTGTTATACGTGTTGATCTTGGTAATGCCAATCTGTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAACTTGCGGTACTTGGAACTCTACAGCAATAATATCAGCGGAACAATTCCAGAAAGATTTGGAAATTTGAAAAACTTGGAGAGCTTGGATCTTTATTCTAACAGTTTAACTGGTCCCATACCTGACACACTGGGCAAACTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGCTTATCAGGAACCATTCCAATGTCTTTAACCACTGTTCCACTTCAACTTCTGGATCTTTCAAATAACCTTCTAACAGGAGACATTCCTGTCAATGGTTCGTTCTCTCTTTTCACACCAATCAGTTTTGCCAATAATCTTCTTCACATTTCTCCCTCTGCTCCTCCTCCGCCAACGAGAGATACACCACGAACATCTTCAGGTGATGGGGCTAATGGAGTCATTGTTGGAGCAATTGTTGCTGCTGCTGCTTTGCTGGTTGTTGTGCCTGCTACTGCACTTAATCTTTGGCGACGAAAAACTCAACAGGACCACTTCTTTGATGTAGCTGCTGAAGAAGATCCTGAAATTAACCTGGGCCAGCTCAAAAAATATTCTCTGCGCGAGCTGCAAGTTGCCACTGATTATTTTAGCCAACAAAACATTTTGGGCAAAGGTGGATTTGGCAAGGTCTATAAAGGTCGTTTGGCTGATGGTTCTCTTGTGGCTGTAAAACGATTGAAGGAGCAGCCTGCTGAGGTTGGAGAGCTTCAATTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTCCATCGTAATCTACTCCGTCTAAATGGATTTTGCATATCACCAACTGAACGATTGCTTGTCTATCCTTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAGCAATGCCAGCCGCCACTCAACTGGGAAATACGTAAACGAGTTGCTATAGGGGCTGCACAGGGACTTGAATATTTACATAATCATTGTGATCCTAAAATTATTCACCGTGATGTGAAAGCTGCAAATATATTACTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGATTGGCTAAACTCATGAACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGGCATATAGCGCCAGAGTACCTCTCGTCTGGAAAGTCTTCTGAAAAATCTGATGTTTTTGGTTATGGAGTAATGCTTCTTGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTAGCAAAAGATGATGACATCATGTTGCTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTCGATCCCAATCTCGAAGGCAATTACGTAGAGGAAGAACTGGAGCAGGTAATTCAAGTTGCACTGCTTTGCACGCAAAGCTCCCCTGTGGAGCGACCAAAGATGTCGGAGGTGTTGCAAATGCTGGAAGGAGATGGTTTGGCTGAAAGATGGGAAGAATGGCAGAAAGAAGAGAGCTCACGCCGAAACTTCAATAATATGGTTCATTCTTCCAACCACCGGAATAGAACTCCCCAGTTTATTGATTCCACTTCTCATATTGCTCCTGATGTGTTGTCTGGTCCAAGATAG | 2820 | 45.07 | MSHSPTSCVGTQSPIVTTSVCLIVCSSFLVVAAILSFLDQPLYLRHAAGRRFGRRFHPPPEATICSLEKKATATEQWIAELESLFEYLNCEDHFKVRGVVFMLRDEARMWWRSIEASEDHAEGPMTWARFKDLLYDYYFPDKVKDDKEIEFLHLTELSCFAPDLVSTSERRIKRFIRGLREEIRGAVALKEPMTFAAALKAALIMDKNMAKKPQVTHSRWEVGASSRFKRKSPPASSDQTSKAHRLASGQATTLPLCGSCNKRHLEQCWLGQSICFKCGKEGGKQKARIFALKKEEAADTNAMVTAPYYQMICGEMRSNEMGRATLMFSAFSPFLRLILAMAFVLRVSANGEGDALNAFKLSLVDPNNVLQSWNTILMNPCTWFHVTCDEKESVIRVDLGNANLSGKLVPQLDQLTNLRYLELYSNNISGTIPERFGNLKNLESLDLYSNSLTGPIPDTLGKLTKLSTLRLNNNSLSGTIPMSLTTVPLQLLDLSNNLLTGDIPVNGSFSLFTPISFANNLLHISPSAPPPPTRDTPRTSSGDGANGVIVGAIVAAAALLVVVPATALNLWRRKTQQDHFFDVAAEEDPEINLGQLKKYSLRELQVATDYFSQQNILGKGGFGKVYKGRLADGSLVAVKRLKEQPAEVGELQFQTEVEMISMAVHRNLLRLNGFCISPTERLLVYPYMANGSLASCLRERKQCQPPLNWEIRKRVAIGAAQGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSSGKSSEKSDVFGYGVMLLELVTGQKAFDLARLAKDDDIMLLDWVKGLLNDKKLETLVDPNLEGNYVEEELEQVIQVALLCTQSSPVERPKMSEVLQMLEGDGLAERWEEWQKEESSRRNFNNMVHSSNHRNRTPQFIDSTSHIAPDVLSGPR | 939 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 27124074 | 27150007 | - | CmPI595203_09g014890.1 | Cmu09g1489 | 424718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g1489 | 939 | MobiDBLite | consensus disorder prediction | 215 | 244 | - | - | |
Cmu09g1489 | 939 | Gene3D | Transferase(Phosphotransferase) domain 1 | 688 | 905 | - | - | |
Cmu09g1489 | 939 | Gene3D | Phosphorylase Kinase; domain 1 | 580 | 687 | - | - | |
Cmu09g1489 | 939 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 688 | 905 | - | - | |
Cmu09g1489 | 939 | Gene3D | Ribonuclease Inhibitor | 349 | 528 | IPR032675 | - | |
Cmu09g1489 | 939 | MobiDBLite | consensus disorder prediction | 230 | 244 | - | - | |
Cmu09g1489 | 939 | Pfam | Leucine rich repeat N-terminal domain | 350 | 389 | IPR013210 | - | |
Cmu09g1489 | 939 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1489 | 939 | SMART | serkin_6 | 611 | 885 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1489 | 939 | SUPERFAMILY | Protein kinase-like (PK-like) | 592 | 886 | IPR011009 | - | |
Cmu09g1489 | 939 | SUPERFAMILY | L domain-like | 351 | 523 | - | - | |
Cmu09g1489 | 939 | Pfam | Retrotransposon gag protein | 99 | 158 | IPR005162 | - | |
Cmu09g1489 | 939 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 334 | 910 | - | - | |
Cmu09g1489 | 939 | ProSitePatterns | Protein kinases ATP-binding region signature. | 617 | 639 | IPR017441 | GO:0005524(InterPro) | |
Cmu09g1489 | 939 | MobiDBLite | consensus disorder prediction | 904 | 939 | - | - | |
Cmu09g1489 | 939 | ProSiteProfiles | Protein kinase domain profile. | 611 | 898 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1489 | 939 | FunFam | Somatic embryogenesis receptor kinase 1 | 580 | 687 | - | - | |
Cmu09g1489 | 939 | MobiDBLite | consensus disorder prediction | 907 | 929 | - | - | |
Cmu09g1489 | 939 | Pfam | Leucine rich repeat | 416 | 476 | IPR001611 | GO:0005515(InterPro) | |
Cmu09g1489 | 939 | Pfam | Protein tyrosine and serine/threonine kinase | 613 | 885 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1489 | 939 | FunFam | Somatic embryogenesis receptor kinase 1 | 348 | 533 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1350 | Cmu-Chr1:26812343 | Cmu09g1489 | Cmu-Chr9:27124074 | 5.70E-72 | dispersed | |
Cmu02g0832 | Cmu-Chr2:9842856 | Cmu09g1489 | Cmu-Chr9:27124074 | 1.50E-34 | dispersed | |
Cmu03g1520 | Cmu-Chr3:12003947 | Cmu09g1489 | Cmu-Chr9:27124074 | 1.90E-07 | dispersed | |
Cmu09g1489 | Cmu-Chr9:27124074 | Cmu10g1709 | Cmu-Chr10:19803611 | 3.70E-210 | dispersed | |
Cmu11g0921 | Cmu-Chr11:12532098 | Cmu09g1489 | Cmu-Chr9:27124074 | 6.20E-50 | dispersed | |
Cmu11g1075 | Cmu-Chr11:19575389 | Cmu09g1489 | Cmu-Chr9:27124074 | 3.10E-19 | dispersed | |
Cmu09g1489 | Cmu-Chr9:27124074 | Cmu07g1697 | Cmu-Chr7:32242753 | 6.70E-119 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75799 | PF00069 | Pkinase | 1.00E-44 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g1489 | K13416 | - | csv:101216386 | 1012.68 |