Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1503 ATGAGCGGACGAATCGTGAGCGATGAAGGAATGGGACAAGCAGAGCAGAGAAACGAAGCGTTGAACATTGCATCACCCTCAAAGGTGGGTGTGCCGCCGAAGAAGAACGTGTGGGAAGAGTTTAATTCTGTGGTGAAAGAGACGTTTTTCTCTGATCAGCCTCTTCGTCATTTCAAAGACCAACCTATGCATAAGAAGGTTGCTCTCTTTGTCCAAGGTCTCTTCCCCATATTCCAATGGGGAAGGGGATATAACTTTAGTAAGTTCAAAGGGGATCTCATTGCTGGCTTAACCATTGCTAGTCTCTGCATTCCTCAAGACATTGGATATGCCAAGCTCGCTAATTTACCTCCTGAAAATGGACTTTATAGTAGTTTTGTCCCGCCGTTGGTATACGCGGTGATGGGGAGCTCTAGGGATATTGCAATCGGCCCCGTTGCTGTGGTGTCGCTTTTGCTGGGGACCCTGCTAGGGCAGGTGTACGACCCGGTTAAAGAGGTGGAGCAATACAAACGGCTGGCTTACACCGCAACTTTCTTCGCCGGAGTAACTCAGTTGGCTCTAGGGTTCCTCCGGCTCGGATTCTTGATTGACTTTCTGTCGCACGCGGCGGTTGTCGGGTTCATGGGAGGTGCGGCCGTCACCATCGCCCTTCAGCAGCTGAAAGGTCTTCTTGGCATAGTAAACTTCACCAAGAAAACTGATATAATTTCTGTAATGCGCTCTGTTTGGAGTAATGTGCACCATGGGTGGAACTGGGAGACTATACTCATAGGCGTTTCATTTCTGGCCTTTCTTTTGGCTACAAAATACATTGGCAAGAAATACAAGAAACTGTTCTGGATTCCAGCCATTGCCCCCTTAACATCTGTTATACTTTCCACATTTTTGGTGTACATTACTCGAGCAGATAAACATGGAGTTCAGATTGTAAGACACTTAGATAAAGGAATAAATCCACCATCCCTTGATAAGATATTCTTCCATGGAGACGATCTCACCCAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTGATTGGCCTAACGGAAGCAGTGGCAATTGCAAGAACATTTGCAGACCTAAAAGACTATGAGATTGACGGTAACAAAGAAATGATGGCTCTTGGAACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCCACAGGATCGTTCTCTCGGTCGGCGGTGAACTACATGGCCGGCTGCAACACACCGATGTCGAACATCGTCATGGCATGCATCGTTCTCTTGACATTAGAGCTCATCACGCCCCTTTTCAAGTACACCCCTAATGCCATTCTCGCCTCCATCATTATTTGTGCCGTCATCGGTCTCATTGACATCGATGCCGTGATTTTGCTTTGGAAGATCGACAAATTCGACTTCATTGCCTGCATGGGGGCTTTCTTCGGTGTCATCTTTGATTCCGTTGAGATTGGTCTTCTCATTGCTGTTAGTTTGTCATTGTCCAAAATTCTATTGCAAGTAACAAGACCGAGAATTGCGTTGCTTGGGAAGCTCCCAAAGATTCCTATTTTTAGAAACATTTTGCAGTACCCTGGGGCAAAGAAGATTGCAGGAGTTCTAATGGTTAGGGTTGATTCTTCAGTATACTTCTCCAATGCCAATTATGTCAAAGAAAGGATACTGAGATGGCTGGCAGATGAAACAGAGAAGCTAGAAGACCAATCTTTGCCAATCAAAGTCGTGGTCGTCGACATGTCTCCCGTATCCGATATCGACACGAGTGGCATCCATGCCTTGGAGGGTTTGCACTCTCATTTGCATAAGAAGGAAATTGCCCTTGCACTTGCAAATCCAGGCCCAGTGATCATGGAGAAGCTCTTAGCTTCAAACTTTGATAAGCTCATTGGAGAAGACAACATTTTCCTCAGTGTTAACGAAGCTATTAAGATTTATGCTCCAGATGCTGTTCTTGATCCTTAA 1956 45.81 MSGRIVSDEGMGQAEQRNEALNIASPSKVGVPPKKNVWEEFNSVVKETFFSDQPLRHFKDQPMHKKVALFVQGLFPIFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPPENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLGQVYDPVKEVEQYKRLAYTATFFAGVTQLALGFLRLGFLIDFLSHAAVVGFMGGAAVTIALQQLKGLLGIVNFTKKTDIISVMRSVWSNVHHGWNWETILIGVSFLAFLLATKYIGKKYKKLFWIPAIAPLTSVILSTFLVYITRADKHGVQIVRHLDKGINPPSLDKIFFHGDDLTQGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCNTPMSNIVMACIVLLTLELITPLFKYTPNAILASIIICAVIGLIDIDAVILLWKIDKFDFIACMGAFFGVIFDSVEIGLLIAVSLSLSKILLQVTRPRIALLGKLPKIPIFRNILQYPGAKKIAGVLMVRVDSSVYFSNANYVKERILRWLADETEKLEDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHSHLHKKEIALALANPGPVIMEKLLASNFDKLIGEDNIFLSVNEAIKIYAPDAVLDP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 27550222 27557087 + CmPI595203_09g015030.1 Cmu09g1503 424732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1503 651 Pfam STAS domain 523 639 IPR002645 -
Cmu09g1503 651 PANTHER SULFATE TRANSPORTER 64 641 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g1503 651 SUPERFAMILY SpoIIaa-like 526 642 IPR036513 -
Cmu09g1503 651 FunFam Sulfate transporter 31 501 645 - -
Cmu09g1503 651 NCBIfam sulfate permease 76 639 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g1503 651 Pfam Sulfate permease family 89 470 IPR011547 GO:0016020(InterPro)
Cmu09g1503 651 Gene3D STAS domain 516 646 IPR036513 -
Cmu09g1503 651 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Cmu09g1503 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1490 Cmu-Chr3:11229215 Cmu09g1503 Cmu-Chr9:27550222 9.90E-165 dispersed
Cmu09g1503 Cmu-Chr9:27550222 Cmu11g0124 Cmu-Chr11:1759506 9.20E-176 dispersed
Cmu09g1503 Cmu-Chr9:27550222 Cmu11g1533 Cmu-Chr11:27641386 5.30E-248 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1503 K17470 - csv:101202746 1177.93