Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1510 ATGACAAAACTTCGTTTTAATTCAATGCTCGTCTTGGTTGTGTCTGTCGCGGTGATATTCACCTTTTGTAGCACTCTCGTGCATGGCCAAGCTACACGCATTGGCTTCTACTCCAACTCTTGCCCTCAAGTCGAGTCCATTATTGCATCAACAGTCCGATCTCATTTTCAATCTGACCCTAGAATTGCTCCAGGTTTGTTAAGAATGCACTTCCATGACTGTTTCGTTCGGGGTTGTGATGCTTCTGTGCTTCTTGCTGGCTCCAATAGCGAGAGGACTGCGCCGCCCAACCTTTCGTTAAATGGGTTTGAAGTGATTGATGATGCTAAGTCTCAGCTCGAAGCTGCTTGTCCTGGCATTGTATCTTGTGCTGACATTCTTGCTCTTGCTGCCCGTGACTCTGTAGTTTTGACAAGTGGACTACGTTGGTCAGTGCCCACAGGACGAAGAGATGGCACAATTTCTTTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCAATTGACGTTCAAAAGCAAAAATTTAGCGACAAAGGTCTCAACACTCAAGATCTTGTCACTCTTGTGGGTGGACACACAATTGGCACAACACAATGCCAATTTTTCAACTACAGACTCTTCAACTTCACAAACAATGGACCAGATCCAAGCATGGACCCAGCGTTCGTGACTCAGATGCAAGCGCTGTGCCCTCAGAACGGCGACGGTAGCCGCAGGGTTGCATTGGACACAGGCAGCGCCGGGCGGTTCGACACCATGTTCTTCTCAAACTTGAGGAACGGACGTGGGGTTTTGGAGTCTGATCAAAAGCTATGGACCGACGCTTCCACTCGCACTTTTGTCCAACGCTTTCTGGGTTTGAGAGGCGTCTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTTAAGATGAGTAACATTGAAGTTAAGACTGGAACTCAAGGAGAAATTCGGAAAGTTTGTTCTGCAGTTAACTAA 990 46.77 MTKLRFNSMLVLVVSVAVIFTFCSTLVHGQATRIGFYSNSCPQVESIIASTVRSHFQSDPRIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTAPPNLSLNGFEVIDDAKSQLEAACPGIVSCADILALAARDSVVLTSGLRWSVPTGRRDGTISLASEANNLPGFTDSIDVQKQKFSDKGLNTQDLVTLVGGHTIGTTQCQFFNYRLFNFTNNGPDPSMDPAFVTQMQALCPQNGDGSRRVALDTGSAGRFDTMFFSNLRNGRGVLESDQKLWTDASTRTFVQRFLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGTQGEIRKVCSAVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 27852788 27854788 + CmPI595203_09g015100.1 Cmu09g1510 424739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1510 329 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cmu09g1510 329 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu09g1510 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PANTHER PEROXIDASE 25-RELATED 20 325 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cmu09g1510 329 Gene3D Peroxidase, domain 2 164 308 - -
Cmu09g1510 329 FunFam Peroxidase 35 177 - -
Cmu09g1510 329 FunFam Peroxidase 164 308 - -
Cmu09g1510 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 Gene3D - 36 329 - -
Cmu09g1510 329 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1510 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cmu09g1510 329 Pfam Peroxidase 49 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1166 Cmu-Chr1:20972333 Cmu09g1510 Cmu-Chr9:27852788 5.40E-64 dispersed
Cmu06g1171 Cmu-Chr6:22496087 Cmu09g1510 Cmu-Chr9:27852788 6.00E-107 dispersed
Cmu06g1173 Cmu-Chr6:22515417 Cmu09g1510 Cmu-Chr9:27852788 4.30E-106 dispersed
Cmu08g1354 Cmu-Chr8:25760689 Cmu09g1510 Cmu-Chr9:27852788 2.90E-66 dispersed
Cmu09g0457 Cmu-Chr9:4277891 Cmu09g1510 Cmu-Chr9:27852788 3.50E-62 dispersed
Cmu09g1476 Cmu-Chr9:26503243 Cmu09g1510 Cmu-Chr9:27852788 4.20E-76 dispersed
Cmu09g1510 Cmu-Chr9:27852788 Cmu11g0585 Cmu-Chr11:6426450 1.20E-62 dispersed
Cmu09g1510 Cmu-Chr9:27852788 Cmu09g1511 Cmu-Chr9:27885655 3.10E-119 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1510 K00430 - csv:101217567 574.704