Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu09g1638 | ATGGCCCTGTTCTCACTCTCCGCATCGGCCCCACCTCCACCATCTTCATCGCCGACCATTGCCCACAAGATCCTTGTCCAAAACGGTGCTCTCTTTGCTGACCGTCCACCGGCGCTACCCGTTGGCAAGGTCATCACTTCCAACCAGCACAACATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGACGTAATCTCACCTCCCAAGTTCTCCATCCTTCCCGTGTTAGGTCTTACAGTCAAGCTCGCAAGTGGGTTTTGGATATTCTTGTCAATCGTCTTCAATCTCAATCTGAATCTGGAAGCCCCGTCTCAGTCATCGAGAATTTTCAGTACGCCATGTTTTGTTTGCTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAATCCCAGATCCGCGAAGTCGAGAACGTGGAACGAGCGCTTATATTGAGTTTTCCGCGTTTTAACATTCTCAATTTCTGGCCTAAATTTACAAAGATTTTTCTTCGAAAACGCTGGGAGGCGTTTTTCCAACTAAGAAGGAACCAAGTGAAGGTCCTAACCCGTTTGATCGAAGCCCGAAGGAAAGCCAATCAAAACAGAGCAAACAGAGCCGAAAATGAAGAAAGAGAAGAAGAAGAATTCGTGGTGTCATATGTCGATACACTGCTGGAATTGGAGCTCCCTGACGAGAAGAGAAAGCTCAATGATGACGAAATGGTCACATTATGCTCTGAGTTTCTCAACGCCGGCACAGATACAACGTCGACGGCCCTGCAATGGATAATGGCAAATTTAGTGAAATACCCAGAAATCCAAAACAAACTTTATGCAGAGATGAAAGGAAAAATGGGAGATGGAACAGGGGAAGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCACATCTGAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGCGCATTTCGTGCTGCCACACTCGGTGAAAGAAGATACAGAGTTGGGAAATTATGTGATACCAAAGAAAGGGACTGTAAATTTCATGGTGGCGGAAATGGGTCGGGATCCAAAAGTGTGGGAAGATCCGAATGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGGAAAGAAGAAGAAGTAGCAGAGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCAGGATGGAGTGTGGCGATTCTCCATTTGGAGTATTTCGTTGCTAATTTGGTTTGGCGGTTCGAATGGAAGGCCGTGGATGGAGACGAAGTTGATATGTCGGAGAAGGTAGAGCTCACAGTCTCGATGAACAATCCCCTAAAAGCCAAAATACATCCAAGGATTCATATTTGA | 1359 | 47.09 | MALFSLSASAPPPPSSSPTIAHKILVQNGALFADRPPALPVGKVITSNQHNISSASYGPLWRLLRRNLTSQVLHPSRVRSYSQARKWVLDILVNRLQSQSESGSPVSVIENFQYAMFCLLVLMCFGDKLEESQIREVENVERALILSFPRFNILNFWPKFTKIFLRKRWEAFFQLRRNQVKVLTRLIEARRKANQNRANRAENEEREEEEFVVSYVDTLLELELPDEKRKLNDDEMVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLYAEMKGKMGDGTGEEVKEEDLGKLPHLKAVVLEGLRRHPPAHFVLPHSVKEDTELGNYVIPKKGTVNFMVAEMGRDPKVWEDPNAFKPERFMKGGKEEEVAEFDVTGSKEIKMMPFGAGRRICPGWSVAILHLEYFVANLVWRFEWKAVDGDEVDMSEKVELTVSMNNPLKAKIHPRIHI | 452 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 31423591 | 31424949 | + | CmPI595203_09g016380.1 | Cmu09g1638 | 424867 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu09g1638 | 452 | CDD | CYP77_89 | 19 | 443 | - | - | |
| Cmu09g1638 | 452 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 388 | 397 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu09g1638 | 452 | SUPERFAMILY | Cytochrome P450 | 16 | 449 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | FunFam | Cytochrome P450 family protein | 15 | 451 | - | - | |
| Cmu09g1638 | 452 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 15 | 448 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cmu09g1638 | 452 | Pfam | Cytochrome P450 | 17 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | P450 superfamily signature | 395 | 406 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | P450 superfamily signature | 386 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | P450 superfamily signature | 246 | 263 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | P450 superfamily signature | 301 | 312 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 300 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 235 | 252 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 255 | 281 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 341 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 115 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 20 | 41 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 395 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | PRINTS | E-class P450 group I signature | 385 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g1638 | 452 | Coils | Coil | 186 | 210 | - | - | |
| Cmu09g1638 | 452 | Gene3D | Cytochrome P450 | 15 | 451 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu09g1638 | Cmu-Chr9:31423591 | Cmu07g0204 | Cmu-Chr7:1947914 | 5.80E-44 | dispersed | |
| Cmu09g1637 | Cmu-Chr9:31373972 | Cmu09g1638 | Cmu-Chr9:31423591 | 4.40E-176 | tandem | |
| Cmu09g1638 | Cmu-Chr9:31423591 | Cmu09g1639 | Cmu-Chr9:31433120 | 4.00E-210 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu09g1638 | K24184 | - | csv:101220777 | 745.347 |