Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1652 ATGAAAGCTTCTCTGTATACATTTTCAATGCTAACTCACCTCTTTCTCCTCCTTCTTCTTCCCTATCTTTCTCTCTTAGTTGACTCAGTTTCTTTCAAGATTGATCAATTCGAGCCAACTGAAACTCGATTACTCTACCAAGGAGATGCTGTTCCTACTAATGGAGCAGTTATGTTTAGTGATCCTGCATATTCCTGTCTTGTTGGACAAGCTATTTACAAAGATGCTATCCCAATTTGGGACTCTGAAACAGGAAAACTCACTGATTTCACAACCCATTTCTCCTTCACCATTGATACTCAAAATGCTTCACACTATGGCAATGGAGTTGCTTTTTTCTTGGCTCCAGCTGGGTTTCATATCCCTCCAAATTCAGCTGGTGGGTATCTTGGCCTTTTCAATAAGACCTACGCTGATTCATCCATAAACCAAATCCTTCATGTTGAGTTTGATTCTTACTCCAATGAATGGGATCCTAAATTTGAACATGTGGGTATCAATATTAACTCTGTTTCTTCCTCCAATTTCACAAAGTGGAATGTCAGCTTACATAGTTTAGACACTGTTGATGTGTTTATCTCCTATGATTCAACCACCAAATACTTGAGTGTCTCATGGATTAATGAAAAGACAGCAACTTCTCTTGAAAATACAACTTTGAGTTACCAGATTGATCTCATGAAGATTCTTCCTCAATGGGCAACGGTAGGATTTTCAGCTGCAACAGGGGCATATTTAGAGAGACATTTGCTATTTTCTTGGGAGTTTAACTCCAGTTTAGAAATGAAACAACCAGCTAGTACTGAAAAGAGTGGGAAAAAAGTTGATGTAATTGTGGGTGTGACCGTTTCAATAGGAGTTTCAATTTTAATAGCAATTGTAGCCTTTGTAGTACTTTGGAGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTCATAAGCTACTAGCCATGGCTACCAACAACTTCTCCAATGAAAGGAAGCTTGGTCAAGGAGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTTCGCCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATCTCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCTTCTGCATTGCTATATCTCCATGAAGAATGGGAACAATGTGTGGTTCATAGAGACATTAAATCAAGTAATGTGATGTTGGATTCAAACTTCAATGTCAAGCTTGGGGATTTTGGGTTAGCTAGATTAATGGACCATGAGTTGGGAGCTCAAACAACTGGGTTGGTTGGAACTTTGGGCTACTTAGCTCCAGAATATATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCTACTGGAAGAATGTCAAGAACCTCCATGGAAACAGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGATCGATGGCATGGATGAGAAATTGCAATCTGATTGTGACAAAAAACAAGTGGAATGTTTGATGCTTGTTGGATTATGGAGTGCTTATCCAGATCCTAATCTTAGACCTTCCATAAAACAAGCAATCCAAGTTCTTAACTTTGAGACAACAATGCCAAATCTTCCAAATAAAATGCCTGTTCCTATATATCCTGCTCCTCCCACGTCAATGAGCTCAAATGAAGCTTCCATTACTGTAAGTCTTGACATGGGTCGTTGA 1971 39.62 MKASLYTFSMLTHLFLLLLLPYLSLLVDSVSFKIDQFEPTETRLLYQGDAVPTNGAVMFSDPAYSCLVGQAIYKDAIPIWDSETGKLTDFTTHFSFTIDTQNASHYGNGVAFFLAPAGFHIPPNSAGGYLGLFNKTYADSSINQILHVEFDSYSNEWDPKFEHVGININSVSSSNFTKWNVSLHSLDTVDVFISYDSTTKYLSVSWINEKTATSLENTTLSYQIDLMKILPQWATVGFSAATGAYLERHLLFSWEFNSSLEMKQPASTEKSGKKVDVIVGVTVSIGVSILIAIVAFVVLWRLKQKKRKSEEEKSEEVNLTSINDDLERGAGPRRFSHKLLAMATNNFSNERKLGQGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMETESHKGLVEWVWDLYGSGQLIDGMDEKLQSDCDKKQVECLMLVGLWSAYPDPNLRPSIKQAIQVLNFETTMPNLPNKMPVPIYPAPPTSMSSNEASITVSLDMGR 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31848728 31850698 + CmPI595203_09g016520.1 Cmu09g1652 424881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1652 656 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Cmu09g1652 656 FunFam L-type lectin-domain containing receptor kinase IX.1 28 269 - -
Cmu09g1652 656 Pfam Legume lectin domain 30 270 IPR001220 GO:0030246(InterPro)
Cmu09g1652 656 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g1652 656 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Cmu09g1652 656 CDD lectin_legume_LecRK_Arcelin_ConA 30 260 IPR001220 GO:0030246(InterPro)
Cmu09g1652 656 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Cmu09g1652 656 Pfam Protein kinase domain 348 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g1652 656 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524(InterPro)
Cmu09g1652 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 262 IPR013320 -
Cmu09g1652 656 Gene3D - 27 274 - -
Cmu09g1652 656 CDD STKc_IRAK 353 617 - -
Cmu09g1652 656 PANTHER - 47 626 IPR050528 GO:0005886(PANTHER)
Cmu09g1652 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g1652 656 FunFam Lectin-domain containing receptor kinase A4.3 424 636 - -
Cmu09g1652 656 SUPERFAMILY Protein kinase-like (PK-like) 331 641 IPR011009 -
Cmu09g1652 656 SMART serkin_6 347 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1623 Cmu-Chr9:30966911 Cmu09g1652 Cmu-Chr9:31848728 5.80E-103 dispersed
Cmu09g1652 Cmu-Chr9:31848728 Cmu09g1657 Cmu-Chr9:31891436 6.4e-310 dispersed
Cmu09g1652 Cmu-Chr9:31848728 Cmu09g1655 Cmu-Chr9:31877163 1.20E-55 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75804 PF00069 Pkinase 7.60E-49 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1652 - - - 0.0