Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1763 ATGGGTTTGGCACCTAATGATTCCAAGCTCGAGACATGGATTGAGGGGAAGTCAAAAACAGCTAGCGAGAAGAAGAAGAAGAAGGAGAATGAGTTGGAGGAGGAGACTGGATGTTGGGTTAAGTTGAAGTTCATAGGGAGTTGCATTCCTTCTAGATCAAAGGTTGATAGTTCTCTGAGTGGATCAAAGGTCGATAGCTTCATCAGTGGCACCAGTACTCATTGCGATAGTAAACCTAAACTTGACGAAAAAAGAGATATTCTGGTTACTGCATTGGGGTCATCAGCGACAACTGATAATGCTGAAAGTAGTTCGTCCACGCCCAAGCTCAGTGCAGAGCTGAAGGTTGCTTCTCGGCTTCGTAAGTTCACTTTTAATGAGCTTAAGTTAGCCACGAGAAATTTCCGACCTGAGAGCCTTCTTGGCGAGGGAGGTTTTGGTTGTGTTTTCAAAGGATGGATTGAGGAGAATGGAACTGCTCCTGCTAAACCTGGAACTGGGCTTACAGTTGCAGTCAAGACTCTTAATCATGACGGCCTACAAGGTCACAAGGAGTGGATGGCTGAAGTTAACTTCCTTGGTGACCTCAACCATTCTAATCTTGTAAGATTGATTGGTTGCTGCATTGAAGATGATCAAAGGTTATTAGTTTATGAGTTCATGCCTCGTGGAAGTTTGGAGAATCACCTCTTCAGAAGGCCCTTGCCACTTCCTTGGTCTATTAGATTGAAAATTGCGCTTGGTGCTGCTAAAGGCCTTGCTTTTCTTCATGAAGAAGCTGAAAGACCAGTGATATATCGTGATTTTAAAACGTCTAATATTTTATTAGATGCGGACTACAATGCTAAACTCTCAGATTTTGGACTCGCAAAAGATGGTCCTGAGGGTGACAAAACTCATGTTTCAACTCGGGTTATGGGAACCTATGGTTATGCAGCTCCAGAATATGTGATGACTGGGCATTTGACATCAAAAAGCGATGTCTACAGTTTTGGAGTTGTCTTGCTTGAAATGCTAACCGGTCGAAGATCGATGGATAAAAATAGACCGAATGGGGAGCACAACCTTGTTGAATGGGCTAGACCCTTGCTTGGAGACAAGAGGAAGTTCTACCGGCTGATAGATCCTCGCCTTGAATGTCACTTCTCGATCAAAGGTGCACAAAAAGCTGCCGAGCTTGCAGCTCACTGCCTTAGTAGAGATCCTAAAGCCAGACCTATGATGAGTGAAGTTGTTGAAATTTTAAAACCTTTGCCAAACCTCAAGGACATGGCAAATTCTTCCTATTACTTCCAAACCATGCAAACAGACCGTGCCAGGTCCAACCCCAATGCTAAAAGTGTCGTCCGGACTCAGTCGATTCACCGAAACCTGACAGGAGATAACCTTAATAACCAACTCGAGCAAGGGGGGAACCACATCTGA 1425 44.28 MGLAPNDSKLETWIEGKSKTASEKKKKKENELEEETGCWVKLKFIGSCIPSRSKVDSSLSGSKVDSFISGTSTHCDSKPKLDEKRDILVTALGSSATTDNAESSSSTPKLSAELKVASRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPAKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLGDLNHSNLVRLIGCCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRLKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPLLGDKRKFYRLIDPRLECHFSIKGAQKAAELAAHCLSRDPKARPMMSEVVEILKPLPNLKDMANSSYYFQTMQTDRARSNPNAKSVVRTQSIHRNLTGDNLNNQLEQGGNHI 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33759929 33765124 - CmPI595203_09g017630.1 Cmu09g1763 424992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1763 474 MobiDBLite consensus disorder prediction 12 34 - -
Cmu09g1763 474 FunFam Serine/threonine-protein kinase BIK1 102 220 - -
Cmu09g1763 474 MobiDBLite consensus disorder prediction 1 34 - -
Cmu09g1763 474 FunFam Probable serine/threonine-protein kinase PBL8 221 436 - -
Cmu09g1763 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g1763 474 SUPERFAMILY Protein kinase-like (PK-like) 112 415 IPR011009 -
Cmu09g1763 474 CDD STKc_IRAK 141 418 - -
Cmu09g1763 474 PANTHER OS01G0588500 PROTEIN-RELATED 106 419 IPR050823 -
Cmu09g1763 474 Gene3D Transferase(Phosphotransferase) domain 1 221 439 - -
Cmu09g1763 474 Pfam Protein tyrosine and serine/threonine kinase 139 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g1763 474 Gene3D Phosphorylase Kinase; domain 1 110 220 - -
Cmu09g1763 474 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524(InterPro)
Cmu09g1763 474 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2512 Cmu-Chr5:33966854 Cmu09g1763 Cmu-Chr9:33759929 1.40E-192 dispersed
Cmu06g1197 Cmu-Chr6:22952043 Cmu09g1763 Cmu-Chr9:33759929 2.00E-139 dispersed
Cmu09g1230 Cmu-Chr9:14477038 Cmu09g1763 Cmu-Chr9:33759929 8.00E-92 dispersed
Cmu09g1763 Cmu-Chr9:33759929 Cmu11g0313 Cmu-Chr11:3677060 8.30E-142 dispersed
Cmu08g0836 Cmu-Chr8:20658523 Cmu09g1763 Cmu-Chr9:33759929 2.10E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75808 PF07714 PK_Tyr_Ser-Thr 3.70E-48 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1763 - - - 0.0