Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1798 ATGGAGTTTCTCTTCTTCCTCCTCCTTTCCGTCTTCTCTCATTCCGCCTCCGCCGCTCTCTCCGCCGACTACTACCGGAATTCCTGCCCTGCATTTTCTCAGATCATCCGCGACACTGTCACCAACAAGCAAATCACCACCCCTACCACCGCCGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGACGCCTCCATCCTCATCTCCTCCACCCCCTTCAACGTCGCCGAGCGCAACGCCGACATCAACCTCTCCCTTCCCGGCGACGCCTTCGACGTTGTCGTCCGTGCTAAAACCGCCCTCGAACTCTCTTGCCCCAACACCGTCTCCTGCGCCGACATCCTCACTGCCGCCACTCGCGACCTCCTCACCATGGTTGGCGGCCCTTACTACACCGTCTTCCTCGGCCGCAAAGACGCCAAGGTTTCCAAAGCCTCCGCTATTGAAGGTTCTCTCCCTAGACCCACCATGTCCGTCTCTGAGATCATCAGAATTTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTAGCGTTAAGCGGCGCTCATTCAATTGGCTTCTCGCATTGTAAGGAGTTCGCCTCTGAGATCTTCAATTACAGCAAATCCCCGCCCTACGACAGCCATTACAACCCTCGATTCGCATTAGGGTTACAGCGAGCTTGCGCCGATTACCAGAAGAATCCAACTCTATCGGTTTTTAACGACATTATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAAAGGGTTAGGCCTTTTGAAGTCCGATGGCGGATTGTACAGCGATCCAAGAACGAGGCCGTGGGTGGAGAAATATGCTGCCGATGAGAGCGTGTTCTTCGGGGCGTTTTCTCAAGCGATGGTGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGCCTTTAATTGA 966 54.45 MEFLFFLLLSVFSHSASAALSADYYRNSCPAFSQIIRDTVTNKQITTPTTAAATLRLFFHDCLPNGCDASILISSTPFNVAERNADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILTAATRDLLTMVGGPYYTVFLGRKDAKVSKASAIEGSLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFASEIFNYSKSPPYDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGLLKSDGGLYSDPRTRPWVEKYAADESVFFGAFSQAMVKLGGYGVKVGNEGEIRRRCDAFN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34143049 34144014 - CmPI595203_09g017980.1 Cmu09g1798 425027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1798 321 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 Gene3D Peroxidase, domain 2 158 300 - -
Cmu09g1798 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 FunFam Peroxidase 158 300 - -
Cmu09g1798 321 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601(InterPro)
Cmu09g1798 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cmu09g1798 321 Gene3D - 23 321 - -
Cmu09g1798 321 FunFam Peroxidase 23 167 - -
Cmu09g1798 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 PANTHER - 4 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu09g1798 321 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu09g1798 321 Pfam Peroxidase 37 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1798 Cmu-Chr9:34143049 Cmu11g0774 Cmu-Chr11:8239138 1.10E-73 dispersed
Cmu01g1691 Cmu-Chr1:30634460 Cmu09g1798 Cmu-Chr9:34143049 6.50E-77 transposed
Cmu02g1217 Cmu-Chr2:25019444 Cmu09g1798 Cmu-Chr9:34143049 7.00E-79 transposed
Cmu01g1374 Cmu-Chr1:27216670 Cmu09g1798 Cmu-Chr9:34143049 5.00E-109 wgd
Cmu10g2215 Cmu-Chr10:28284692 Cmu09g1798 Cmu-Chr9:34143049 5.40E-132 wgd
Cmu06g1720 Cmu-Chr6:28222000 Cmu09g1798 Cmu-Chr9:34143049 6.30E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1798 K00430 - csv:105435603 554.673