Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1806 ATGAAGGGAAGGGTAGATATGGTGGAAGTGAAAGACAGAGGGGAAGGAAGGCTTCAGGAAGATATGGCGGTAAGTGGAAGAAGTTTGATGGAAGGAGTTCTCCCATTTCCGGCGATGATAGCGATGGAGTGTATCAACGTCGGTCTCAACACTCTTTTCAAAGCCGCCACCGCCGCCGGCATGAGCCACCACGTGTTCGTCGTCTATTCTTACTCTTTCGCCGCCCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCCACTCGTCTTCCACCTCTCACTTTCTCTCTACTTTCGAAGATCGCTCTTCTCGGATTCATCGGTTCTTCTTCGCAGATTATGGGATACACGGGAATCAATTACAGCTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTTGCCATCATCTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCCAAAGTGATGGGCACAATAATATCAATAATAGGTGCATTTGTGGTCACATTTTACAAAGGTCCAAGGATCATGTTCTCTTCAGAGCCCATTTCTCTTTCACTTCATCACCATCCACAACTATCTTCTTCAGATTCTGATTGGATCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATTCCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCATCATAGCTGCAGTTGTAGGTGTGATTTTTGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTATTTGGATCATGTTTAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCAATGTTTAAGCCGTTATCGATCGTTGTCGCTATCGTAATGGGAGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTCATTGGAGCATCCATAATATCCATAGGGTTTTACACTGTAATGTGGGGAAAATCAAAAGAAGAAATGGGTGTTGGAGAAGAAAAAGAAGAAGGCCATAGCTATAATCTTGATGGTAACAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACACACAGAGATACAGTGCAGACCATCTATGGAAAGGATTGATTGGTACAACTTTTATTTGCCTTCAAGCTCTGGCTAATGGCTATGGCCAAGCATGGGAGGAAATTGTAAAATTTGTTTGTGGTCAGAGCATGGATTCCAAGTTCAACGCTAGTTGGGTCGGTGGTTTAAGCGGGCCGGCCGATGCCCCTTCTCTCTCCCGCTGTCTTCCTCGTTTCGATCCACTCGGAGGACACCTAGTCAGGTTCGGCTCCTACCAACTGGCTTTGCAGCTCCAACCCTCTCTTGCAGAGCCTTTAATTTGA 1467 44.92 MKGRVDMVEVKDRGEGRLQEDMAVSGRSLMEGVLPFPAMIAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLTFSLLSKIALLGFIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISIIGAFVVTFYKGPRIMFSSEPISLSLHHHPQLSSSDSDWIIGSLLLTAEYILVPLWYIVQTKIMKEFPEEATVIFFYNLTVAIIAAVVGVIFETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKSKEEMGVGEEKEEGHSYNLDGNKESNEDQRVPLLGSYNTQRYSADHLWKGLIGTTFICLQALANGYGQAWEEIVKFVCGQSMDSKFNASWVGGLSGPADAPSLSRCLPRFDPLGGHLVRFGSYQLALQLQPSLAEPLI 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34220602 34227430 - CmPI595203_09g018060.1 Cmu09g1806 425035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1806 488 PANTHER WAT1-RELATED PROTEIN 38 363 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu09g1806 488 Pfam EamA-like transporter family 223 347 IPR000620 GO:0016020(InterPro)
Cmu09g1806 488 Pfam EamA-like transporter family 47 176 IPR000620 GO:0016020(InterPro)
Cmu09g1806 488 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 352 - -
Cmu09g1806 488 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1806 Cmu-Chr9:34220602 Cmu10g2203 Cmu-Chr10:28114747 1.50E-77 dispersed
Cmu09g1806 Cmu-Chr9:34220602 Cmu09g1807 Cmu-Chr9:34235840 7.40E-69 tandem
Cmu05g2565 Cmu-Chr5:34384334 Cmu09g1806 Cmu-Chr9:34220602 2.50E-53 transposed
Cmu10g2202 Cmu-Chr10:28098525 Cmu09g1806 Cmu-Chr9:34220602 1.80E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1806 - - - 0.0