Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1813 ATGGATACAAGCTTGTTCAGGGGTCATCCTGAAAAGAGAGATTCATGGAGGACAATCTTCACTTTAGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTTTGTATGTGTATAAAAGCACTTTTGCAGAGAACCTTCAGCACTCTGAGACTAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTTATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCATTGCTCTGTCGCCATGCTCGGTTGAGCTCTCTCCCAAATCACCAACTAGCGGATGAGGAGCTTTCTGCATATACAATTGACAGCCCACAAACTGAAAACACTACTAATTTTAGTTTTAGTTCTTGTCTGAAATCAACTTTGGAGAAATGTAAAGTTCTGCAAAAAATGTTGCTTGTTCTTGCTTTGATTGGGACTTGCATGGTTATTGGAGATGGTGTTCTCACACCAGCAATCTCAGTTTTTTCAGCTGTTTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTAGCGTGTGGCATATTGGTCTTCTTATTCGCATTGCAACACTATGGAACGCATCAGGTTGGGTTCTTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATTAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCCTGGTTTACAAAGCACTCTCGCCATACTACATGTATAAGTTCTTAAAAAAAACCAAAAAGCAAGGTTGGATGGCACTCGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGGCACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTCGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGATAATGAATATCGGATCGGATTCTATGTTTCTGTTCCCGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGTAGTCAAGCGATCATCACCGGCACATTTTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTTCCAAGGGTAAAGATCATTCATACGTCTTCAAAAATACATGGCCAGATTTACATTCCCTTGATCAACTGGATTCTAATGATATTGTGTTTGGCTGTTACCATTGGATTTAGAGACACAAAACGACTAGGCAATGCAGCAGGGTTGGCGGTTATTACTGTTATGCTCGTCTCAACATGTCTAATGTCACTCGTCATTGTATTATGTTGGCGTAAAAGTGTGTTGCTGGCCATAGCCTTCATACTCTTCTTTGGCTCCGTAGAAGCTCTCTACTTCTCTGCTTCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGTTCTTTCATTGACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGCACAGTGAAGAAATATGAAGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCAGTATAGGACCCAAAATTGGGATCGTTCGAGTCCGGGGGATCGGTCTTGTACATACCGAACTCGTTTCGGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCATCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAGTGCCTCATGTGAGGCCTGAGGAAAGGTTTTTAGTTGGACGAGTTGGGCCAAAGGAGTATCGACTCTACCGTTGCATCGCACGGTATGGCTATCGTGACATGCACAAGGACGACTTGGAGTTCGAGAGAGATCTTGCTTGCAGCATTGCAGAATTCATACGGTCCGAGAGAACAGAATGCAACAATTTTAGACACGAAGACTTGGACGACAATGAAAGAATGACAGTGATTGGGACTTCATCAACCCAACTAGACGGTATACAAATGTGTGAAAACGAAACATATGCTTCGCCAATCATGGGAACTTCAGAGATAATAAAGACGGAGCAGTTGAGAAAAAGAGTTAGATTCGTTCTCCCCGAGAGTCCGAAAATGAACATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAGGCAAGGGAGGCAGGAATAGCATTTATAATGGGGCATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGATATGATTTCTTGAGGAAAAATTCAAGAGGGCCATCTTATGCTTTGAGCATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2325 41.89 MDTSLFRGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTIDSPQTENTTNFSFSSCLKSTLEKCKVLQKMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNEYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFILFFGSVEALYFSASLIKFFEGAWVPIVLSLTFLVVMYVWHYGTVKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDMHKDDLEFERDLACSIAEFIRSERTECNNFRHEDLDDNERMTVIGTSSTQLDGIQMCENETYASPIMGTSEIIKTEQLRKRVRFVLPESPKMNIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYALSIPYASTLEVGMVYYV 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34286718 34290530 - CmPI595203_09g018130.1 Cmu09g1813 425042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1813 774 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 774 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu09g1813 774 Pfam K+ potassium transporter C-terminal domain 534 772 IPR053952 -
Cmu09g1813 774 Pfam K+ potassium transporter integral membrane domain 22 521 IPR053951 -
Cmu09g1813 774 NCBIfam potassium uptake protein 22 774 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1326 Cmu-Chr5:15268686 Cmu09g1813 Cmu-Chr9:34286718 1.10E-248 dispersed
Cmu05g2573 Cmu-Chr5:34458125 Cmu09g1813 Cmu-Chr9:34286718 0.00E+00 dispersed
Cmu07g0551 Cmu-Chr7:6602402 Cmu09g1813 Cmu-Chr9:34286718 3.00E-283 dispersed
Cmu09g1813 Cmu-Chr9:34286718 Cmu11g0035 Cmu-Chr11:829102 3.90E-189 dispersed
Cmu03g0683 Cmu-Chr3:1005572 Cmu09g1813 Cmu-Chr9:34286718 1.90E-228 transposed
Cmu10g2199 Cmu-Chr10:28068846 Cmu09g1813 Cmu-Chr9:34286718 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1813 K03549 - csv:101218141 1506.5