Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1839 ATGCAGAATAACGCTGTATTGGCTTTGGCTATGTCTTTTTCCCCTAATTCTATTGCTACGGCTACTGCTATTCCATGCCCTAGCCGAAGCCCTAATTTCCCTCACTTTTCCCACATTCTTCAATTTCGTTCTCAATGTTCCATCTCATGGCGTTCTTCTTCATCCATCTCTCTTTTTTCTTCTCGATTTACTCCGAGGTTTCAGAAATTTGCCATAATGGCTGCTTCTGTGCCGGAGAGTGCCGGCGAGGCTGTGGAATCCGCTGATTTCGTTCATAATCTCCGGCTTGGTGCAATGTTTGGGGTTTGGTACCTTTTGAATATCTACTACAATATTTTCAACAAACAGGTTCTGAAAGCCTTTCCCTTTCCAACTACGGTCACAGCTTTCCAGTTCGGCTGTGGTACGGTCATAGTAAACTTAATGTGGGCTCTTCATTTTCACCATAGACCCAAGATCAATCGATCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACACTGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTTGCGGTTTCATTCACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCACATTTTGGGTTGTTTTTTCTCTGGTACCCGTTGTAGGAGGAGTGGCACTTGCTTCTTTCACTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCCAATCTTACCAATCAATCACGTAATATCTTCAGCAAAAAGTTCATGGTCCACAAAGAGGCATTGGACAATATCAATCTCTTCTCTGTACTTACTATCATTTCGTTTATCCTGTTGGTTCCCTCGGCCCTTCTCCTTGAAGGCAGTAAACTTAGTCCTTCATACCTGCAATTAGCGGCAAATCAAGGGTTGAATATTAGGGAGCTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTCCATAGTTATCAGCAGGTTTCTTATTCAATACTACAGGAAATTTCACCAGTGAGCCATGCAGTAGGAAATTCTTTGAAGCGTGTGGTGGTTATAGGGTCCTCCGTTATTTTCTTCCAAACAGCAGTTTCACCTCTAAACGCCCTAGGAACTGGCATAGCTCTTGTGGGAGTTTTCTTGTATTCAAGGGCAAAGCGTATGAAGCCAAAGCTTAAGTCTTTGTAA 1197 43.78 MQNNAVLALAMSFSPNSIATATAIPCPSRSPNFPHFSHILQFRSQCSISWRSSSSISLFSSRFTPRFQKFAIMAASVPESAGEAVESADFVHNLRLGAMFGVWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTVIVNLMWALHFHHRPKINRSQFAAILPLAVAHTLGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPTFWVVFSLVPVVGGVALASFTEASFNWIGFSSAMASNLTNQSRNIFSKKFMVHKEALDNINLFSVLTIISFILLVPSALLLEGSKLSPSYLQLAANQGLNIRELCIRLLLSGICFHSYQQVSYSILQEISPVSHAVGNSLKRVVVIGSSVIFFQTAVSPLNALGTGIALVGVFLYSRAKRMKPKLKSL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34550101 34557507 - CmPI595203_09g018390.1 Cmu09g1839 425068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1839 398 Pfam Triose-phosphate Transporter family 94 386 IPR004853 -
Cmu09g1839 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 391 - -
Cmu09g1839 398 PANTHER SOLUTE CARRIER FAMILY 35 94 389 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cmu09g1839 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 231 - -
Cmu09g1839 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 94 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1839 Cmu-Chr9:34550101 Cmu10g1364 Cmu-Chr10:6606077 1.10E-57 dispersed
Cmu01g1275 Cmu-Chr1:25362415 Cmu09g1839 Cmu-Chr9:34550101 2.00E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1839 K15283 - csv:101217436 672.544