Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g1858 | ATGGGGTCCGGTAATGGGTTATGTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTTGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGCAAAGTGCACAAGGGGAAATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGATATTGCCAAAACTGAGGCACGCTTTGCTCGGGAGGTTGCTATGTTATCCAGAGTTCAACACAAGAATCTTGCGAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGCGGTACATTAAGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAATGAGGCAGTTGGCTTTGCACTTGATATTGCACGTGCAATGGAATGCTTGCATTCGCATGGCATCATTCACCGTGACCTCAAGCCTGAGAATTTGATCTTGACTGCAGACCACAAAACCGTTAAACTTGCTGATTTTGGTCTTGCTAGAGAAGAGTCGGTAACAGAGATGATGACGGCTGAAACTGGGACTTACAGATGGATGGCTCCGGAGCTATACAGTACAGTAACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGATTATCCGAAATAAGTTGCCTTTCGAAGGCATGTCAAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCGACTGCTGAGAACCTCCCACCGGATTTAGCACCTATTGTGACTTCCTGTTGGACAGAGGACCCAAACGATCGGCCTAACTTCAACCAAATCATACAAATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAGTATGTTGCACCACCACCATTGATGCACCCACCTGAGAATGCAGTTTTGCCGCCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAGCCACAAGACATGGCACGAGGGAAGTCCTGAACAGCGAGATGGAAGAGAAACCGAGTAGTTTCTTCTCGTGTTTCACTGGTAACTGTTATTGA | 1065 | 44.98 | MGSGNGLCSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRKGETPEDIAKTEARFAREVAMLSRVQHKNLAKFIGACKEPIMVIVTELLLGGTLRKYLLSIRPRCLDFNEAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIRNKLPFEGMSNLQAAYAAAFKNLRPTAENLPPDLAPIVTSCWTEDPNDRPNFNQIIQMLLKCLSTIPQPEYVAPPPLMHPPENAVLPPESPGTSSLMAATRHGTREVLNSEMEEKPSSFFSCFTGNCY | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 34711557 | 34714448 | + | CmPI595203_09g018580.1 | Cmu09g1858 | 425087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g1858 | 354 | SMART | serkin_6 | 25 | 292 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 104 | - | - | |
Cmu09g1858 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 297 | - | - | |
Cmu09g1858 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 101 | 114 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 139 | 157 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 256 | 278 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 213 | 235 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | Pfam | Protein tyrosine and serine/threonine kinase | 30 | 285 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | ProSiteProfiles | Protein kinase domain profile. | 25 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g1858 | 354 | FunFam | Kinase suppressor of Ras 1 | 14 | 104 | - | - | |
Cmu09g1858 | 354 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 20 | 286 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cmu09g1858 | 354 | CDD | STKc_MAP3K-like | 31 | 285 | - | - | |
Cmu09g1858 | 354 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 56 | IPR017441 | GO:0005524(InterPro) | |
Cmu09g1858 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 320 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu09g1858 | Cmu-Chr9:34711557 | Cmu10g2969 | Cmu-Chr10:35915022 | 2.50E-114 | dispersed | |
Cmu10g2140 | Cmu-Chr10:27410753 | Cmu09g1858 | Cmu-Chr9:34711557 | 4.70E-150 | wgd | |
Cmu06g1786 | Cmu-Chr6:28879435 | Cmu09g1858 | Cmu-Chr9:34711557 | 2.60E-146 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75812 | PF07714 | PK_Tyr_Ser-Thr | 3.10E-58 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g1858 | - | - | - | 0.0 |