Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1924 ATGGAGAAGGCAGCTGGTAGAATGTTTGAGAAGGCAAAGCCATATTTGGGAGCAATTGCATTAAGGTTTGCTTCAGCAGGAATGTCAATTATTTCAAAGGCTGCTCTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTACTCTATTGGTGCCATTGTTGTTGCTCCTTTTGCTTTTGTATTGGATAGGAAAATAAGACCAAAGATGACTCTCCCGATCTTCGCCAAGATTCTTCTCCTTGGTTTACTCGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGCTACTAAATACACAACTGCTACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCATTTCTAATGGCTTGGATTTGTAGAATGGAGAAGGTGAACATTAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGGACTTTAGTTACAGTTGGAGGAGCAATGATGATGGCTCTTATAAAAGGGCCTTTATTGAGTTTGCCTTGGACCAAACAAAATTTCAATAATCCTCATTCTTATTCCACTCTTCCAAATAACCAACAACCTCTTAAGGCTGCCATTGTTATCACCATTTCAAGTATTTGTTCCTCAGCCTTCACCATTCTTCTGGCACATACAATAAGAACATACCCAGCTGAGCTCACACTAACAACATTCATATGTTTGGCTGGAGCTGTGGAAAGTACTATTTTAGCCTTAGCATTTGAATGGGACAATCCATCTGCATGGGCTTTACATGCAGATTCCATACTCTTGGCTGCCCTCTATGGTGGTATAATGTCTTCTGGAATTGCCTATTATCTTCAAGGAGTAGTGGTGAAGTTAAAAGGACCTGTGTTTGTAACTGCATTCAATCCTCTCAGCATGGTCATAGTTGCCATAATTAGTTCATTCATATTCTCCGAGACACTGCGCTTAGGAAGGGTCATTGGAGCAGTTGTGATAATTATAGGCCTTTACTTGGTTTTGTGGGGCAAGAGCAAAGATAAACTTCCATTCAAAGTGGAGAATGACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAATTGCCAATTTCACTCCAAGACTCAACAACCACAAACCAGCAGCTGAAGGCTTTAGATCAACAATAA 1140 38.77 MEKAAGRMFEKAKPYLGAIALRFASAGMSIISKAALNQGMNQLVTIVYRYSIGAIVVAPFAFVLDRKIRPKMTLPIFAKILLLGLLEPVIAQSLIYSATKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRRLRSQAKILGTLVTVGGAMMMALIKGPLLSLPWTKQNFNNPHSYSTLPNNQQPLKAAIVITISSICSSAFTILLAHTIRTYPAELTLTTFICLAGAVESTILALAFEWDNPSAWALHADSILLAALYGGIMSSGIAYYLQGVVVKLKGPVFVTAFNPLSMVIVAIISSFIFSETLRLGRVIGAVVIIIGLYLVLWGKSKDKLPFKVENDNNNNNNNNNNNNNNNELPISLQDSTTTNQQLKALDQQ 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35295421 35298647 + CmPI595203_09g019240.1 Cmu09g1924 425153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1924 379 MobiDBLite consensus disorder prediction 339 364 - -
Cmu09g1924 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cmu09g1924 379 PANTHER WAT1-RELATED PROTEIN 19 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu09g1924 379 MobiDBLite consensus disorder prediction 340 364 - -
Cmu09g1924 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 332 - -
Cmu09g1924 379 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
Cmu09g1924 379 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1924 Cmu-Chr9:35295421 Cmu09g1926 Cmu-Chr9:35353298 5.50E-104 dispersed
Cmu09g1924 Cmu-Chr9:35295421 Cmu09g1925 Cmu-Chr9:35325957 2.40E-91 tandem
Cmu04g0881 Cmu-Chr4:23351879 Cmu09g1924 Cmu-Chr9:35295421 4.30E-101 wgd
Cmu07g0361 Cmu-Chr7:3528301 Cmu09g1924 Cmu-Chr9:35295421 1.20E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1924 - - - 0.0