Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1926 ATGGAGCATCCCGCCGGAATGTTGAATCAGGCAAAGCCATTTATTGCAGTGATTCTTCAGCAATTCATCTCTGCCGGAATGGTCATCATTTCCAAGTTGGCTCTCAACCAAGGACTCAACCAGCACGTTTTAGTCGTCTACCGCTACACCATTGCTACCATTGTCGTCGCTCCGTTCGCTTTCATCTTCGAGAGGAAAGTGAGACCCAAGATGACTTGGTCCATTTTTGGGAAGGTTGTGTTACTGGGACTATTGGAGCCTGCACTAGACCAAAACTTGTATTATACAGGCATGAAGTACACTACAGCAACCTTTGCATCCGCTATGACTAATATGGTCCCTGGCCTCGTCTTCCTCATGGCTTGGCTTGTTCGGCTTGAGAAGGTTGACGTAAGGCAGGTGTCGAGCCAGGCGAAGATATTAGGAACAGTGGTGGCAGTGGGAGGGGCGATGATAATGACTCTGGTAAGAGGACCAATCTTGAATCTGCCATGGACAAATCACAACCTCCATGACCATTCTGCAGCTGCAACTAACCAGCAAGATCTTCTCAAGGGTTCTCTCATGATCACTATTGGTTGTATTCTTTGGTCTGTTTTCAATGTTCTTCAGGCAATTACAGTAAAAGTATACCCAGCACAACTCTCCTTAACAGCTTTGATATGCTTCACCGGCGCCATACAAGCCTCAGTAATAGCTTTCGCAATGGAAGGGCACAAACCTGCGGCCTGGTCATTACATTTAGATTCAACCCTCTTAGCTCCTTTGTATAGTGGAATCATGTCTTCAGGGGTTTCATATACTATCCAAGCAGCAGTAATGAAAAGGAAAGGGCCAGTTTTTGCAAGTACATTTAGTCCCCTGAGCATGATTATTGTTGCAATCATTAGTTCATTCGCATTATCCGAGATATTATACTTTGGAAGGGTTATTGGAGCAGCTGTAATTATTACAGGCCTTTATTTGGTTCTGTGGGGTAAAATCAAGGATCACGCTCTATACAAATCAGATAGTGAGAAGATGGCCCCACCAGATCAGAAACTGACTGCCATAACTGACAAACCTAAGACTTCAGATAAAGAACTAGGAGTTGATCTTGCTAGGATAAAAACAGTGGATGATTCTGTTTGA 1131 44.3 MEHPAGMLNQAKPFIAVILQQFISAGMVIISKLALNQGLNQHVLVVYRYTIATIVVAPFAFIFERKVRPKMTWSIFGKVVLLGLLEPALDQNLYYTGMKYTTATFASAMTNMVPGLVFLMAWLVRLEKVDVRQVSSQAKILGTVVAVGGAMIMTLVRGPILNLPWTNHNLHDHSAAATNQQDLLKGSLMITIGCILWSVFNVLQAITVKVYPAQLSLTALICFTGAIQASVIAFAMEGHKPAAWSLHLDSTLLAPLYSGIMSSGVSYTIQAAVMKRKGPVFASTFSPLSMIIVAIISSFALSEILYFGRVIGAAVIITGLYLVLWGKIKDHALYKSDSEKMAPPDQKLTAITDKPKTSDKELGVDLARIKTVDDSV 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35353298 35355620 + CmPI595203_09g019260.1 Cmu09g1926 425155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1926 376 PANTHER WAT1-RELATED PROTEIN 15 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu09g1926 376 Pfam EamA-like transporter family 15 152 IPR000620 GO:0016020(InterPro)
Cmu09g1926 376 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020(InterPro)
Cmu09g1926 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 328 - -
Cmu09g1926 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0361 Cmu-Chr7:3528301 Cmu09g1926 Cmu-Chr9:35353298 1.40E-107 dispersed
Cmu07g0362 Cmu-Chr7:3566024 Cmu09g1926 Cmu-Chr9:35353298 1.20E-109 dispersed
Cmu09g1924 Cmu-Chr9:35295421 Cmu09g1926 Cmu-Chr9:35353298 5.50E-104 dispersed
Cmu09g1926 Cmu-Chr9:35353298 Cmu10g2382 Cmu-Chr10:30243126 1.70E-84 dispersed
Cmu09g1925 Cmu-Chr9:35325957 Cmu09g1926 Cmu-Chr9:35353298 5.60E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1926 - - - 0.0