Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1932 ATGGAGATTACATACTCATCACCTAGCGCCACCAGTCTTGCTTTCTCTAATTCTGCTCTTTCCGCCATGCCTGCCTCCGGCCGGCCTGTCAAGGTCATTCCATTGCAGCATCCTAGTACGACGTCCGCCTCCTCGGCCGTTGGTTTCTACGCCGGCACTCTGGTAAAGTCATGGACGACGAAGGTTAAGCGGATGACTTGGATTCACTGGATGGAGCTTCTGTTACCTTGCTCCCGTTGGATTAGAACGTATAAATGGCGGGAGTATTTACAGAGCGATATCTTGTCCGGGATTACTATTGGCATCATGCTCGTTCCGCAGGCAATGTCTTATGCAAAACTAGCCGGGCTTCAACCTATATACGGACTTTATTCCGGTTTTCTCCCTTTGTTCATCTATGCAATTTTTGGTTCTTCTCGTCAGCTTGCAGTTGGTCCAGTAGCATTGGTTTCTCTACTGGTTTCCAATGTCCTGGGTGGAATTGTCAACTCATCTGAGGAATTATATACTGAACTCGCAATATTATTGGCACTCATGGTTGGAATATTGGAATGCGTGATGGGTCTCTTGAGGCTTGGATGGCTTATTCGCTTTATCAGCCACTCTGTAATCTCTGGCTTTACTACAGCTTCTGCCTTTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTATGATGTATCAAGAAGTAGCAGAATCGTGCCTCTAATTGAGAGCATAATAGCTGGAGCAGACGGGTTCTTATGGGCACCTTTTATAATGGGATCAGTCATCCTTGCGGTACTTCAAATCATGAAGCATTTGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCCCTTACAGCCGTTGTTTTGGGCACAACTTTGACGAAAGTATTAAATCTACCTTCCATTACTTTGGTTGGAGACATTCCCCAAGGCCTTCCAATGTTTTCTATTCCTAAAAGATTTGAGCACGTGAAGTCGTTGATTCCAACTGCCTTTCTGATCACTGGAGTGGCTATATTGGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAATGGGTATGAGTTAGATTCAAATCAGGAGTTATTTGGCCTTGGAGTAGCCAATGTTGTCGGCTCATTTTTTTCTGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCTGTGAACCATGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAATCATTATGGGCGGTGCCCTTCTTTTCTTGACTCCGCTGTTTGAGCACATTCCTCAGTGTGCTTTGGCTGCCATTGTCATCTCTGCGGTTTTAACTTTGGTGGATTACGAGGAAGCTATTTTTTTGTGGCGTATAGATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTACTACGTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGTCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACCACTGTGTATAGAAATATTCAACAGTATCCTGAGGCATATACCTATAATGGGATCGTGATTGTTCGAATTGATGCACCAATTTATTTTGCAAACACAAGTTACATCAAAGACAGGTTACGTGATTATGAAGTTGAAGTGGATCGATTTACTGGTCGTGGACCGGACGTTGAAAGAGTCTATTTTGTGATTATAGAGATGGCACCTGTTACTTACATAGATTCAAGTGCTGTCCAAGCTCTAAAAGAATTGTATCAAGAGTACAAACTTCGCGATATTCAGATTGCCATTTCCAATCCGAATCGAGATGTTCTGCTTACATTTTCAAGATCTGGCGTCGTTGAGCTTATTGGCAAGGAGTGGTTTTTTGTGAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAACATGTGGAGAGCTTAAATGAAACAAACAAAATATCAGATCCATCACCTAAAGATGGATCATCAAGCTTTCTCCAAAGTTTACTGAAGTCTAGAAGTGAGGATTTATCAGACGATGTATCATGGAATAGTCAAGCACTAAGTTTACGCGCCATTAACGCGCCGCCGATCTTCTATAAAACGGCAGGTTTCTTCGGAGTTCGTTTTACATCAACTCCTTCTTCTTCCCCTTCCTCAGCTGCCTACACGGTTTCTCCTCCTGCTGTTTTGTCACTGCTTTCCTCCGCCATTGTTATTGCACTCCGAATCACTGCTTCACTGCTTCAGTTCGTTAAAAATGTTTTTCGTTGCATCATTATTCTTTCGCCGCAGTGTTGCACTAAGCATCATACTGCAAGGAATGAGCCTCCCATTGCATTAATCAACATGTTGCAGTTCAAGGCCGACGGATGCGATAAAGGATTCTTAGTGGGGTCTCTGCCGGAACGAGTATATAACTGTTGA 2418 43.38 MEITYSSPSATSLAFSNSALSAMPASGRPVKVIPLQHPSTTSASSAVGFYAGTLVKSWTTKVKRMTWIHWMELLLPCSRWIRTYKWREYLQSDILSGITIGIMLVPQAMSYAKLAGLQPIYGLYSGFLPLFIYAIFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGILECVMGLLRLGWLIRFISHSVISGFTTASAFVIGLSQVKYFLGYDVSRSSRIVPLIESIIAGADGFLWAPFIMGSVILAVLQIMKHLGKTRKHLRFLRVAGPLTAVVLGTTLTKVLNLPSITLVGDIPQGLPMFSIPKRFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIIMGGALLFLTPLFEHIPQCALAAIVISAVLTLVDYEEAIFLWRIDKKDFLLWVITAITTLFLGIEIGVLIGVGVSLVFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLRDYEVEVDRFTGRGPDVERVYFVIIEMAPVTYIDSSAVQALKELYQEYKLRDIQIAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLNETNKISDPSPKDGSSSFLQSLLKSRSEDLSDDVSWNSQALSLRAINAPPIFYKTAGFFGVRFTSTPSSSPSSAAYTVSPPAVLSLLSSAIVIALRITASLLQFVKNVFRCIIILSPQCCTKHHTARNEPPIALINMLQFKADGCDKGFLVGSLPERVYNC 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35407142 35420362 - CmPI595203_09g019320.1 Cmu09g1932 425161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1932 805 Pfam STAS domain 514 633 IPR002645 -
Cmu09g1932 805 NCBIfam sulfate permease 76 633 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g1932 805 Gene3D STAS domain 493 641 IPR036513 -
Cmu09g1932 805 CDD STAS_SulP_like_sulfate_transporter 514 630 - -
Cmu09g1932 805 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
Cmu09g1932 805 ProSiteProfiles STAS domain profile. 513 637 IPR002645 -
Cmu09g1932 805 FunFam Sulfate transporter 31 493 640 - -
Cmu09g1932 805 PANTHER SULFATE TRANSPORTER 63 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu09g1932 805 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cmu09g1932 805 Pfam Sulfate permease family 90 463 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1932 Cmu-Chr9:35407142 Cmu11g0124 Cmu-Chr11:1759506 4.60E-92 dispersed
Cmu09g1932 Cmu-Chr9:35407142 Cmu11g1533 Cmu-Chr11:27641386 1.60E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1932 K18059 - csv:101202870 1210.67