Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g1952 ATGGATTCGGCCCATCATCGTGGACACGGCCAAGACTCCCCACTTTTTCCCCTAAAAGTTCCACCGGTCGACGGCCGAGCCGACGGCGCCGATAGCGACGGCGGCAGCAACTTGGGGTTGGTTTTGTTTTGTTGTTCTGTCTGCCTTGCCGCTGATGCTGTTAAAAATAATAATAAGAGTCACACAGAGCCTGAGCCCACTCGGTCTACTACTAACTTTTCTTTTCCCAACGCCCTCTCTGATCTAAGAGAGAAAGCTGCTGAGATTCAGAGAAGAAATGGAGATTTTGTGCTGAGGTATTGTAATGGAGGATTGTTTGTTTTCAGTCTCTTTCTGGGTTTTCCCTCTAAATCTCCTATTTCATATGAATTTGTTTCACGGGAAATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCCGCTCAGGCTGCGGCGGAGGTAGTTCGGCTCACTACCATCCCTCGGTACTCCGGGAAATCAAAGGAAGAAATAGCAACCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCGAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGTAGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGGTCCCGGTTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCGGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGCCTCGCCGGCCAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGATCAAGAACGTTGCAGAGAGAGATTTTACCGGCGGGAGCAGATAG 1842 50.16 MDSAHHRGHGQDSPLFPLKVPPVDGRADGADSDGGSNLGLVLFCCSVCLAADAVKNNNKSHTEPEPTRSTTNFSFPNALSDLREKAAEIQRRNGDFVLRYCNGGLFVFSLFLGFPSKSPISYEFVSREMGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIATIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRSSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPANSRRHSGPPKIDASPIKNVAERDFTGGSR 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35600847 35608544 - CmPI595203_09g019520.1 Cmu09g1952 425181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g1952 613 SMART iq_5 241 263 IPR000048 GO:0005515(InterPro)
Cmu09g1952 613 MobiDBLite consensus disorder prediction 1 31 - -
Cmu09g1952 613 PANTHER IQ-DOMAIN 5-RELATED 133 566 - -
Cmu09g1952 613 MobiDBLite consensus disorder prediction 505 522 - -
Cmu09g1952 613 Pfam Protein of unknown function (DUF4005) 515 588 IPR025064 -
Cmu09g1952 613 MobiDBLite consensus disorder prediction 452 479 - -
Cmu09g1952 613 MobiDBLite consensus disorder prediction 448 613 - -
Cmu09g1952 613 ProSiteProfiles IQ motif profile. 242 270 - -
Cmu09g1952 613 Pfam IQ calmodulin-binding motif 245 263 IPR000048 GO:0005515(InterPro)
Cmu09g1952 613 MobiDBLite consensus disorder prediction 523 539 - -
Cmu09g1952 613 Coils Coil 305 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0039 Cmu-Chr1:324979 Cmu09g1952 Cmu-Chr9:35600847 1.30E-25 dispersed
Cmu03g1772 Cmu-Chr3:23563207 Cmu09g1952 Cmu-Chr9:35600847 8.60E-33 dispersed
Cmu04g0918 Cmu-Chr4:23663822 Cmu09g1952 Cmu-Chr9:35600847 2.00E-106 dispersed
Cmu05g1008 Cmu-Chr5:9315675 Cmu09g1952 Cmu-Chr9:35600847 5.80E-23 dispersed
Cmu05g1839 Cmu-Chr5:28444706 Cmu09g1952 Cmu-Chr9:35600847 2.20E-27 dispersed
Cmu05g2144 Cmu-Chr5:30893121 Cmu09g1952 Cmu-Chr9:35600847 6.50E-109 dispersed
Cmu06g0115 Cmu-Chr6:1054277 Cmu09g1952 Cmu-Chr9:35600847 1.00E-25 dispersed
Cmu06g0624 Cmu-Chr6:7019374 Cmu09g1952 Cmu-Chr9:35600847 2.20E-15 dispersed
Cmu07g0985 Cmu-Chr7:24572503 Cmu09g1952 Cmu-Chr9:35600847 4.40E-25 dispersed
Cmu07g1498 Cmu-Chr7:30146659 Cmu09g1952 Cmu-Chr9:35600847 1.70E-21 dispersed
Cmu09g0023 Cmu-Chr9:529912 Cmu09g1952 Cmu-Chr9:35600847 2.00E-09 dispersed
Cmu09g0071 Cmu-Chr9:913359 Cmu09g1952 Cmu-Chr9:35600847 1.50E-20 dispersed
Cmu01g0729 Cmu-Chr1:8205121 Cmu09g1952 Cmu-Chr9:35600847 1.80E-27 transposed
Cmu01g2294 Cmu-Chr1:35199519 Cmu09g1952 Cmu-Chr9:35600847 9.90E-33 transposed
Cmu02g0247 Cmu-Chr2:2308686 Cmu09g1952 Cmu-Chr9:35600847 5.80E-14 transposed
Cmu05g0018 Cmu-Chr5:251208 Cmu09g1952 Cmu-Chr9:35600847 2.60E-30 transposed
Cmu06g0268 Cmu-Chr6:3055150 Cmu09g1952 Cmu-Chr9:35600847 6.00E-29 transposed
Cmu10g2316 Cmu-Chr10:29424115 Cmu09g1952 Cmu-Chr9:35600847 6.40E-20 transposed
Cmu10g2771 Cmu-Chr10:34284696 Cmu09g1952 Cmu-Chr9:35600847 1.90E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g1952 - - - 0.0